Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SGO1Q5FBB7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGO1Q5FBB7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGO1Q5FBB7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGO1Q5FBB7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SGO1Q5FBB7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGO1Q5FBB7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SGO1Q5FBB7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.36■□□□□ 0.05
SGO1Q5FBB7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SGO1Q5FBB7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SGO1Q5FBB7 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 KRT8P37-201ENST00000451609 1420 ntBASIC15.35■□□□□ 0.05
SGO1Q5FBB7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 KRT18P32-201ENST00000424695 1287 ntBASIC15.35■□□□□ 0.05
SGO1Q5FBB7 FAM58DP-201ENST00000428076 619 ntBASIC15.35■□□□□ 0.05
SGO1Q5FBB7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 DNAJB3-201ENST00000446806 729 ntBASIC15.35■□□□□ 0.05
SGO1Q5FBB7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 AL450472.2-201ENST00000603663 1156 ntBASIC15.35■□□□□ 0.05
SGO1Q5FBB7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 AC026979.3-201ENST00000607315 403 ntBASIC15.35■□□□□ 0.05
SGO1Q5FBB7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.35■□□□□ 0.05
SGO1Q5FBB7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.35■□□□□ 0.05
SGO1Q5FBB7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 AC004461.1-201ENST00000412461 403 ntBASIC15.34■□□□□ 0.05
SGO1Q5FBB7 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.34■□□□□ 0.05
SGO1Q5FBB7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 MIR3687-2-201ENST00000577708 61 ntBASIC15.34■□□□□ 0.05
SGO1Q5FBB7 MIR3687-1-201ENST00000614492 61 ntBASIC15.34■□□□□ 0.05
SGO1Q5FBB7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
SGO1Q5FBB7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms