Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.4□□□□□ -0.1
LTBQ06643 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LTBQ06643 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LTBQ06643 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.4□□□□□ -0.1
LTBQ06643 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.4□□□□□ -0.1
LTBQ06643 SPDYE14P-201ENST00000442619 822 ntBASIC14.4□□□□□ -0.1
LTBQ06643 UGT1A2P-201ENST00000454886 866 ntBASIC14.4□□□□□ -0.1
LTBQ06643 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.4□□□□□ -0.1
LTBQ06643 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.4□□□□□ -0.1
LTBQ06643 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
LTBQ06643 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.4□□□□□ -0.1
LTBQ06643 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.4□□□□□ -0.1
LTBQ06643 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 AC009093.7-201ENST00000623853 1223 ntBASIC14.4□□□□□ -0.1
LTBQ06643 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.4□□□□□ -0.1
LTBQ06643 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.4□□□□□ -0.1
LTBQ06643 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.4□□□□□ -0.1
LTBQ06643 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.4□□□□□ -0.1
LTBQ06643 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.4□□□□□ -0.1
LTBQ06643 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.4□□□□□ -0.1
LTBQ06643 AC105250.1-201ENST00000509378 2057 ntBASIC14.4□□□□□ -0.1
LTBQ06643 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 KRT8P37-201ENST00000451609 1420 ntBASIC14.4□□□□□ -0.1
LTBQ06643 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.4□□□□□ -0.1
LTBQ06643 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LTBQ06643 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LTBQ06643 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LTBQ06643 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.39□□□□□ -0.11
LTBQ06643 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.39□□□□□ -0.11
LTBQ06643 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LTBQ06643 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 AC009090.5-201ENST00000624886 2285 ntBASIC14.39□□□□□ -0.11
LTBQ06643 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.39□□□□□ -0.11
LTBQ06643 ATP5G2P4-201ENST00000442175 420 ntBASIC14.39□□□□□ -0.11
LTBQ06643 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LTBQ06643 EEF1DP4-201ENST00000446006 880 ntBASIC14.39□□□□□ -0.11
LTBQ06643 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.39□□□□□ -0.11
LTBQ06643 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 AC026150.2-201ENST00000564693 1156 ntBASIC14.39□□□□□ -0.11
LTBQ06643 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 AC018529.1-201ENST00000613063 361 ntBASIC14.39□□□□□ -0.11
LTBQ06643 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.39□□□□□ -0.11
LTBQ06643 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.39□□□□□ -0.11
LTBQ06643 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.39□□□□□ -0.11
LTBQ06643 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.39□□□□□ -0.11
LTBQ06643 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LTBQ06643 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.39□□□□□ -0.11
LTBQ06643 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms