Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CDR2Q01850 KRT8P44-201ENST00000441609 1350 ntBASIC16.78■□□□□ 0.28
CDR2Q01850 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDR2Q01850 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.78■□□□□ 0.28
CDR2Q01850 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.78■□□□□ 0.28
CDR2Q01850 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
CDR2Q01850 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.78■□□□□ 0.28
CDR2Q01850 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDR2Q01850 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.78■□□□□ 0.28
CDR2Q01850 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CDR2Q01850 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CDR2Q01850 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.78■□□□□ 0.28
CDR2Q01850 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDR2Q01850 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.78■□□□□ 0.28
CDR2Q01850 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDR2Q01850 RPL37AP1-201ENST00000412502 279 ntBASIC16.78■□□□□ 0.28
CDR2Q01850 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.78■□□□□ 0.28
CDR2Q01850 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.78■□□□□ 0.28
CDR2Q01850 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.78■□□□□ 0.28
CDR2Q01850 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.78■□□□□ 0.28
CDR2Q01850 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.78■□□□□ 0.28
CDR2Q01850 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.78■□□□□ 0.28
CDR2Q01850 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.78■□□□□ 0.28
CDR2Q01850 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.78■□□□□ 0.28
CDR2Q01850 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.78■□□□□ 0.28
CDR2Q01850 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CDR2Q01850 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDR2Q01850 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CDR2Q01850 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDR2Q01850 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.77■□□□□ 0.28
CDR2Q01850 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.77■□□□□ 0.28
CDR2Q01850 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.77■□□□□ 0.28
CDR2Q01850 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.77■□□□□ 0.28
CDR2Q01850 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
CDR2Q01850 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.77■□□□□ 0.28
CDR2Q01850 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.77■□□□□ 0.28
CDR2Q01850 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.77■□□□□ 0.28
CDR2Q01850 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CDR2Q01850 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.77■□□□□ 0.28
CDR2Q01850 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.77■□□□□ 0.28
CDR2Q01850 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.77■□□□□ 0.28
CDR2Q01850 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.77■□□□□ 0.28
CDR2Q01850 MIR6069-201ENST00000620069 79 ntBASIC16.77■□□□□ 0.28
CDR2Q01850 Z92544.3-201ENST00000624747 417 ntBASIC16.77■□□□□ 0.28
CDR2Q01850 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.77■□□□□ 0.28
CDR2Q01850 AC079781.4-201ENST00000641908 219 ntBASIC16.77■□□□□ 0.28
CDR2Q01850 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDR2Q01850 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.77■□□□□ 0.27
CDR2Q01850 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDR2Q01850 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDR2Q01850 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDR2Q01850 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDR2Q01850 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDR2Q01850 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.77■□□□□ 0.27
CDR2Q01850 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
CDR2Q01850 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.77■□□□□ 0.27
CDR2Q01850 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CDR2Q01850 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDR2Q01850 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDR2Q01850 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDR2Q01850 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CDR2Q01850 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDR2Q01850 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDR2Q01850 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDR2Q01850 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms