Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ASIC1P78348 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.57■□□□□ 0.4
ASIC1P78348 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
ASIC1P78348 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ASIC1P78348 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.57■□□□□ 0.4
ASIC1P78348 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ASIC1P78348 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ASIC1P78348 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.57■□□□□ 0.4
ASIC1P78348 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.57■□□□□ 0.4
ASIC1P78348 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ASIC1P78348 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ASIC1P78348 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ASIC1P78348 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.56■□□□□ 0.4
ASIC1P78348 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.56■□□□□ 0.4
ASIC1P78348 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.56■□□□□ 0.4
ASIC1P78348 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ASIC1P78348 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ASIC1P78348 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
ASIC1P78348 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ASIC1P78348 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ASIC1P78348 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ASIC1P78348 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.56■□□□□ 0.4
ASIC1P78348 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.56■□□□□ 0.4
ASIC1P78348 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.56■□□□□ 0.4
ASIC1P78348 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.56■□□□□ 0.4
ASIC1P78348 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.56■□□□□ 0.4
ASIC1P78348 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.56■□□□□ 0.4
ASIC1P78348 MIR6069-201ENST00000620069 79 ntBASIC17.56■□□□□ 0.4
ASIC1P78348 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ASIC1P78348 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ASIC1P78348 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ASIC1P78348 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.56■□□□□ 0.4
ASIC1P78348 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.56■□□□□ 0.4
ASIC1P78348 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ASIC1P78348 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
ASIC1P78348 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.55■□□□□ 0.4
ASIC1P78348 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.55■□□□□ 0.4
ASIC1P78348 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 FO538757.1-201ENST00000623083 1397 ntBASIC17.55■□□□□ 0.4
ASIC1P78348 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ASIC1P78348 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ASIC1P78348 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
ASIC1P78348 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ASIC1P78348 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.55■□□□□ 0.4
ASIC1P78348 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.55■□□□□ 0.4
ASIC1P78348 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.55■□□□□ 0.4
ASIC1P78348 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 KLF2P3-201ENST00000451977 1087 ntBASIC17.55■□□□□ 0.4
ASIC1P78348 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.55■□□□□ 0.4
ASIC1P78348 HLA-V-204ENST00000476601 1289 ntBASIC17.55■□□□□ 0.4
ASIC1P78348 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.55■□□□□ 0.4
ASIC1P78348 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.55■□□□□ 0.4
ASIC1P78348 AL138828.2-201ENST00000615812 383 ntBASIC17.55■□□□□ 0.4
ASIC1P78348 AC139530.3-201ENST00000620344 690 ntBASIC17.55■□□□□ 0.4
ASIC1P78348 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.55■□□□□ 0.4
ASIC1P78348 AL033527.5-202ENST00000641632 1098 ntBASIC17.55■□□□□ 0.4
ASIC1P78348 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.55■□□□□ 0.4
ASIC1P78348 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.55■□□□□ 0.4
ASIC1P78348 AC023157.3-201ENST00000619086 2088 ntBASIC17.55■□□□□ 0.4
ASIC1P78348 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
ASIC1P78348 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ASIC1P78348 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.55■□□□□ 0.4
ASIC1P78348 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms