Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.55■□□□□ 0.24
USP46P62068 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.55■□□□□ 0.24
USP46P62068 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 KRT17P7-201ENST00000451704 1104 ntBASIC16.55■□□□□ 0.24
USP46P62068 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.55■□□□□ 0.24
USP46P62068 AC092552.1-201ENST00000547243 906 ntBASIC16.55■□□□□ 0.24
USP46P62068 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.55■□□□□ 0.24
USP46P62068 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 AL513523.2-202ENST00000427283 2040 ntBASIC16.55■□□□□ 0.24
USP46P62068 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.55■□□□□ 0.24
USP46P62068 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
USP46P62068 AP003680.1-201ENST00000598970 3660 ntBASIC16.55■□□□□ 0.24
USP46P62068 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.55■□□□□ 0.24
USP46P62068 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
USP46P62068 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.54■□□□□ 0.24
USP46P62068 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
USP46P62068 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
USP46P62068 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.54■□□□□ 0.24
USP46P62068 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
USP46P62068 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 AL512384.1-201ENST00000406683 331 ntBASIC16.54■□□□□ 0.24
USP46P62068 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.54■□□□□ 0.24
USP46P62068 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.54■□□□□ 0.24
USP46P62068 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.54■□□□□ 0.24
USP46P62068 RN7SL837P-201ENST00000463010 287 ntBASIC16.54■□□□□ 0.24
USP46P62068 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.54■□□□□ 0.24
USP46P62068 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.54■□□□□ 0.24
USP46P62068 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.54■□□□□ 0.24
USP46P62068 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.54■□□□□ 0.24
USP46P62068 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.54■□□□□ 0.24
USP46P62068 RN7SL275P-201ENST00000582762 335 ntBASIC16.54■□□□□ 0.24
USP46P62068 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.54■□□□□ 0.24
USP46P62068 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
USP46P62068 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
USP46P62068 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
USP46P62068 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.54■□□□□ 0.24
USP46P62068 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 AC105917.1-201ENST00000506637 2539 ntBASIC16.54■□□□□ 0.24
USP46P62068 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
USP46P62068 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.53■□□□□ 0.24
USP46P62068 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
USP46P62068 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
USP46P62068 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.53■□□□□ 0.24
USP46P62068 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
USP46P62068 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
USP46P62068 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
USP46P62068 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.53■□□□□ 0.24
USP46P62068 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.53■□□□□ 0.24
USP46P62068 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 U91328.1-201ENST00000437528 223 ntBASIC16.53■□□□□ 0.24
USP46P62068 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
USP46P62068 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.53■□□□□ 0.24
USP46P62068 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms