Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2D3P61077 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
UBE2D3P61077 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D3P61077 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC11.26□□□□□ -0.61
UBE2D3P61077 AL590627.1-203ENST00000421194 1026 ntBASIC11.26□□□□□ -0.61
UBE2D3P61077 MED15P5-201ENST00000423150 992 ntBASIC11.26□□□□□ -0.61
UBE2D3P61077 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC11.26□□□□□ -0.61
UBE2D3P61077 KRT18P3-201ENST00000451602 1288 ntBASIC11.26□□□□□ -0.61
UBE2D3P61077 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
UBE2D3P61077 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.26□□□□□ -0.61
UBE2D3P61077 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.26□□□□□ -0.61
UBE2D3P61077 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
UBE2D3P61077 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D3P61077 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC11.26□□□□□ -0.61
UBE2D3P61077 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.26□□□□□ -0.61
UBE2D3P61077 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC11.26□□□□□ -0.61
UBE2D3P61077 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D3P61077 AC027601.4-201ENST00000611259 610 ntBASIC11.26□□□□□ -0.61
UBE2D3P61077 FAM197Y3-203ENST00000618346 717 ntBASIC11.26□□□□□ -0.61
UBE2D3P61077 AC008267.7-201ENST00000624570 1194 ntBASIC11.26□□□□□ -0.61
UBE2D3P61077 AC092865.6-201ENST00000642101 219 ntBASIC11.26□□□□□ -0.61
UBE2D3P61077 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.26□□□□□ -0.61
UBE2D3P61077 UCKL1-AS1-201ENST00000623569 3602 ntBASIC11.26□□□□□ -0.61
UBE2D3P61077 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2D3P61077 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 AC136621.1-201ENST00000624017 2304 ntBASIC11.26□□□□□ -0.61
UBE2D3P61077 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
UBE2D3P61077 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.26□□□□□ -0.61
UBE2D3P61077 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
UBE2D3P61077 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.26□□□□□ -0.61
UBE2D3P61077 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D3P61077 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.25□□□□□ -0.61
UBE2D3P61077 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D3P61077 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D3P61077 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.25□□□□□ -0.61
UBE2D3P61077 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.25□□□□□ -0.61
UBE2D3P61077 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
UBE2D3P61077 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
UBE2D3P61077 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 AL390755.1-201ENST00000623716 2027 ntBASIC11.25□□□□□ -0.61
UBE2D3P61077 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D3P61077 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
UBE2D3P61077 NEK7-201ENST00000367383 586 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D3P61077 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D3P61077 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D3P61077 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 AL355306.1-201ENST00000415580 579 ntBASIC11.25□□□□□ -0.61
UBE2D3P61077 AL671277.1-201ENST00000429656 993 ntBASIC11.25□□□□□ -0.61
UBE2D3P61077 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.25□□□□□ -0.61
UBE2D3P61077 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
UBE2D3P61077 FAM86C2P-203ENST00000528684 1004 ntBASIC11.25□□□□□ -0.61
UBE2D3P61077 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.25□□□□□ -0.61
UBE2D3P61077 AL135744.1-201ENST00000565098 629 ntBASIC11.25□□□□□ -0.61
UBE2D3P61077 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.25□□□□□ -0.61
UBE2D3P61077 AC027307.2-201ENST00000591252 911 ntBASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms