Protein–RNA interactions for Protein: P59091

LINC00315, Putative uncharacterized protein encoded by LINC00315, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00315P59091 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
LINC00315P59091 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00315P59091 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
LINC00315P59091 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 AL355306.1-201ENST00000415580 579 ntBASIC11.34□□□□□ -0.59
LINC00315P59091 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00315P59091 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.34□□□□□ -0.59
LINC00315P59091 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC11.34□□□□□ -0.59
LINC00315P59091 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 CCDC74BP1-201ENST00000508880 1123 ntBASIC11.34□□□□□ -0.59
LINC00315P59091 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.34□□□□□ -0.59
LINC00315P59091 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00315P59091 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00315P59091 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
LINC00315P59091 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC11.34□□□□□ -0.59
LINC00315P59091 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC11.34□□□□□ -0.59
LINC00315P59091 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.34□□□□□ -0.59
LINC00315P59091 AC027612.4-201ENST00000605371 583 ntBASIC11.34□□□□□ -0.59
LINC00315P59091 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC11.34□□□□□ -0.59
LINC00315P59091 AL513210.1-201ENST00000629608 234 ntBASIC11.34□□□□□ -0.59
LINC00315P59091 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
LINC00315P59091 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 KRT8P37-201ENST00000451609 1420 ntBASIC11.34□□□□□ -0.59
LINC00315P59091 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.34□□□□□ -0.59
LINC00315P59091 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LINC00315P59091 BSG-215ENST00000618006 1329 ntTSL 2 BASIC11.34□□□□□ -0.59
LINC00315P59091 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC11.33□□□□□ -0.59
LINC00315P59091 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.59
LINC00315P59091 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
LINC00315P59091 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
LINC00315P59091 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
LINC00315P59091 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC00315P59091 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
LINC00315P59091 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC00315P59091 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
LINC00315P59091 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
LINC00315P59091 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC00315P59091 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LINC00315P59091 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00315P59091 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.33□□□□□ -0.6
LINC00315P59091 TSEN15P1-201ENST00000423257 515 ntBASIC11.33□□□□□ -0.6
LINC00315P59091 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.33□□□□□ -0.6
LINC00315P59091 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC00315P59091 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.33□□□□□ -0.6
LINC00315P59091 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC00315P59091 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC00315P59091 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC00315P59091 AC022145.2-201ENST00000598203 171 ntBASIC11.33□□□□□ -0.6
LINC00315P59091 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC11.33□□□□□ -0.6
LINC00315P59091 AC099522.2-201ENST00000607001 744 ntBASIC11.33□□□□□ -0.6
LINC00315P59091 AC105339.1-204ENST00000636249 355 ntBASIC11.33□□□□□ -0.6
LINC00315P59091 AL359258.3-201ENST00000622910 2331 ntBASIC11.33□□□□□ -0.6
LINC00315P59091 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
LINC00315P59091 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
LINC00315P59091 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC00315P59091 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms