Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 AC127383.1-201ENST00000444697 1800 ntBASIC16.61■□□□□ 0.25
SNX16P57768 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SNX16P57768 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.61■□□□□ 0.25
SNX16P57768 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 CICP13-201ENST00000422015 2789 ntBASIC16.61■□□□□ 0.25
SNX16P57768 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX16P57768 TMBIM7P-203ENST00000641617 1718 ntBASIC16.61■□□□□ 0.25
SNX16P57768 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX16P57768 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
SNX16P57768 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX16P57768 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX16P57768 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX16P57768 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.61■□□□□ 0.25
SNX16P57768 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.61■□□□□ 0.25
SNX16P57768 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SNX16P57768 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SNX16P57768 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.6■□□□□ 0.25
SNX16P57768 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX16P57768 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.6■□□□□ 0.25
SNX16P57768 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX16P57768 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX16P57768 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX16P57768 RPL5P21-201ENST00000404620 815 ntBASIC16.6■□□□□ 0.25
SNX16P57768 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.6■□□□□ 0.25
SNX16P57768 AC015922.1-201ENST00000421102 1152 ntBASIC16.6■□□□□ 0.25
SNX16P57768 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.6■□□□□ 0.25
SNX16P57768 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SNX16P57768 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.6■□□□□ 0.25
SNX16P57768 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.6■□□□□ 0.25
SNX16P57768 AL844908.2-201ENST00000609461 460 ntBASIC16.6■□□□□ 0.25
SNX16P57768 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 PAUPAR-201ENST00000630360 2965 ntBASIC16.6■□□□□ 0.25
SNX16P57768 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.6■□□□□ 0.25
SNX16P57768 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 AC105250.1-201ENST00000509378 2057 ntBASIC16.6■□□□□ 0.25
SNX16P57768 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SNX16P57768 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.6■□□□□ 0.25
SNX16P57768 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SNX16P57768 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SNX16P57768 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SNX16P57768 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SNX16P57768 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SNX16P57768 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.59■□□□□ 0.25
SNX16P57768 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.59■□□□□ 0.25
SNX16P57768 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.59■□□□□ 0.25
SNX16P57768 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SNX16P57768 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.59■□□□□ 0.25
SNX16P57768 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
SNX16P57768 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
SNX16P57768 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SNX16P57768 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.59■□□□□ 0.25
SNX16P57768 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SNX16P57768 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.59■□□□□ 0.25
SNX16P57768 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.59■□□□□ 0.25
SNX16P57768 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms