Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.12□□□□□ -0.31
RIPPLY3P57055 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RIPPLY3P57055 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RIPPLY3P57055 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
RIPPLY3P57055 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.12□□□□□ -0.31
RIPPLY3P57055 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.12□□□□□ -0.31
RIPPLY3P57055 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
RIPPLY3P57055 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.12□□□□□ -0.31
RIPPLY3P57055 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 AC016700.1-201ENST00000429424 312 ntBASIC13.11□□□□□ -0.31
RIPPLY3P57055 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 MIR4741-201ENST00000579822 90 ntBASIC13.11□□□□□ -0.31
RIPPLY3P57055 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 GMCL1P1-201ENST00000463439 1581 ntBASIC13.11□□□□□ -0.31
RIPPLY3P57055 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.11□□□□□ -0.31
RIPPLY3P57055 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
RIPPLY3P57055 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.1□□□□□ -0.31
RIPPLY3P57055 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 AC012441.1-201ENST00000446669 685 ntBASIC13.1□□□□□ -0.31
RIPPLY3P57055 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 RPSAP36-202ENST00000494591 1261 ntBASIC13.1□□□□□ -0.31
RIPPLY3P57055 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 AC025181.2-201ENST00000606994 802 ntBASIC13.1□□□□□ -0.31
RIPPLY3P57055 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.1□□□□□ -0.31
RIPPLY3P57055 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RIPPLY3P57055 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms