Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.95□□□□□ -0.02
GFERP55789 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.95□□□□□ -0.02
GFERP55789 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFERP55789 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFERP55789 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFERP55789 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
GFERP55789 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
GFERP55789 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFERP55789 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
GFERP55789 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
GFERP55789 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.95□□□□□ -0.02
GFERP55789 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFERP55789 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.95□□□□□ -0.02
GFERP55789 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFERP55789 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
GFERP55789 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.95□□□□□ -0.02
GFERP55789 AC134312.5-201ENST00000568031 1313 ntBASIC14.94□□□□□ -0.02
GFERP55789 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
GFERP55789 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
GFERP55789 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 AL139384.1-201ENST00000612143 3047 ntBASIC14.94□□□□□ -0.02
GFERP55789 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
GFERP55789 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GFERP55789 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
GFERP55789 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 AC012441.1-201ENST00000446669 685 ntBASIC14.94□□□□□ -0.02
GFERP55789 BNIP3P42-201ENST00000454982 569 ntBASIC14.94□□□□□ -0.02
GFERP55789 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.94□□□□□ -0.02
GFERP55789 APRT-204ENST00000563655 709 ntTSL 5 BASIC14.94□□□□□ -0.02
GFERP55789 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.94□□□□□ -0.02
GFERP55789 BNIP3P29-201ENST00000598302 571 ntBASIC14.94□□□□□ -0.02
GFERP55789 AC093813.1-201ENST00000605066 256 ntBASIC14.94□□□□□ -0.02
GFERP55789 AC011447.5-201ENST00000616168 564 ntBASIC14.94□□□□□ -0.02
GFERP55789 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.94□□□□□ -0.02
GFERP55789 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.94□□□□□ -0.02
GFERP55789 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.94□□□□□ -0.02
GFERP55789 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.94□□□□□ -0.02
GFERP55789 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
GFERP55789 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
GFERP55789 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GFERP55789 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
GFERP55789 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
GFERP55789 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GFERP55789 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.93□□□□□ -0.02
GFERP55789 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
GFERP55789 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.93□□□□□ -0.02
GFERP55789 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.93□□□□□ -0.02
GFERP55789 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.93□□□□□ -0.02
GFERP55789 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.93□□□□□ -0.02
GFERP55789 KLF2P4-201ENST00000451959 1225 ntBASIC14.93□□□□□ -0.02
GFERP55789 GAPDHP40-201ENST00000505218 1006 ntBASIC14.93□□□□□ -0.02
GFERP55789 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.93□□□□□ -0.02
GFERP55789 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.93□□□□□ -0.02
GFERP55789 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.93□□□□□ -0.02
GFERP55789 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
GFERP55789 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms