Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE1AP54750 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE1AP54750 TNRC18P2-201ENST00000417666 2714 ntBASIC19.15■□□□□ 0.66
PDE1AP54750 AC148477.4-201ENST00000613430 1793 ntBASIC19.15■□□□□ 0.66
PDE1AP54750 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE1AP54750 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
PDE1AP54750 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE1AP54750 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.15■□□□□ 0.66
PDE1AP54750 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.15■□□□□ 0.66
PDE1AP54750 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.15■□□□□ 0.66
PDE1AP54750 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PDE1AP54750 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE1AP54750 AC008738.7-201ENST00000609744 511 ntBASIC19.15■□□□□ 0.66
PDE1AP54750 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE1AP54750 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE1AP54750 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE1AP54750 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE1AP54750 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE1AP54750 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDE1AP54750 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
PDE1AP54750 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDE1AP54750 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.15■□□□□ 0.66
PDE1AP54750 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PDE1AP54750 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDE1AP54750 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDE1AP54750 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDE1AP54750 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDE1AP54750 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PDE1AP54750 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC19.14■□□□□ 0.65
PDE1AP54750 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.14■□□□□ 0.65
PDE1AP54750 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 AL133267.1-201ENST00000398220 340 ntBASIC19.14■□□□□ 0.65
PDE1AP54750 RPL5P21-201ENST00000404620 815 ntBASIC19.14■□□□□ 0.65
PDE1AP54750 PMS2P2-201ENST00000425039 1128 ntBASIC19.14■□□□□ 0.65
PDE1AP54750 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.14■□□□□ 0.65
PDE1AP54750 SPDYE18-201ENST00000510091 1050 ntBASIC19.14■□□□□ 0.65
PDE1AP54750 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PDE1AP54750 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PDE1AP54750 AC092337.1-201ENST00000568699 1129 ntBASIC19.14■□□□□ 0.65
PDE1AP54750 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.14■□□□□ 0.65
PDE1AP54750 AC005498.2-205ENST00000593218 784 ntBASIC19.14■□□□□ 0.65
PDE1AP54750 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.14■□□□□ 0.65
PDE1AP54750 AC004840.1-201ENST00000636359 365 ntBASIC19.14■□□□□ 0.65
PDE1AP54750 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PDE1AP54750 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 AL121723.1-201ENST00000445194 1519 ntBASIC19.14■□□□□ 0.65
PDE1AP54750 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC19.14■□□□□ 0.65
PDE1AP54750 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PDE1AP54750 CICP11-201ENST00000434745 2827 ntBASIC19.14■□□□□ 0.65
PDE1AP54750 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.14■□□□□ 0.65
PDE1AP54750 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDE1AP54750 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDE1AP54750 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.13■□□□□ 0.65
PDE1AP54750 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PDE1AP54750 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.13■□□□□ 0.65
PDE1AP54750 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.13■□□□□ 0.65
PDE1AP54750 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.13■□□□□ 0.65
PDE1AP54750 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.13■□□□□ 0.65
PDE1AP54750 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PDE1AP54750 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDE1AP54750 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PDE1AP54750 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.13■□□□□ 0.65
PDE1AP54750 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDE1AP54750 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PDE1AP54750 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PDE1AP54750 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
PDE1AP54750 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PDE1AP54750 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDE1AP54750 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.12■□□□□ 0.65
PDE1AP54750 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms