Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 KRT17P8-201ENST00000540749 863 ntBASIC17.31■□□□□ 0.36
GPC3P51654 AL359711.2-201ENST00000563105 872 ntBASIC17.31■□□□□ 0.36
GPC3P51654 AC008735.3-201ENST00000596646 500 ntBASIC17.31■□□□□ 0.36
GPC3P51654 AC133539.2-201ENST00000604757 467 ntBASIC17.31■□□□□ 0.36
GPC3P51654 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GPC3P51654 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
GPC3P51654 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.31■□□□□ 0.36
GPC3P51654 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
GPC3P51654 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.31■□□□□ 0.36
GPC3P51654 AL121723.1-201ENST00000445194 1519 ntBASIC17.31■□□□□ 0.36
GPC3P51654 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
GPC3P51654 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
GPC3P51654 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.3■□□□□ 0.36
GPC3P51654 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.3■□□□□ 0.36
GPC3P51654 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
GPC3P51654 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.3■□□□□ 0.36
GPC3P51654 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
GPC3P51654 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.3■□□□□ 0.36
GPC3P51654 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.3■□□□□ 0.36
GPC3P51654 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.3■□□□□ 0.36
GPC3P51654 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.3■□□□□ 0.36
GPC3P51654 MIR4313-201ENST00000580760 101 ntBASIC17.3■□□□□ 0.36
GPC3P51654 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
GPC3P51654 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.3■□□□□ 0.36
GPC3P51654 AC000095.1-201ENST00000603208 874 ntBASIC17.3■□□□□ 0.36
GPC3P51654 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.3■□□□□ 0.36
GPC3P51654 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.3■□□□□ 0.36
GPC3P51654 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.3■□□□□ 0.36
GPC3P51654 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
GPC3P51654 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
GPC3P51654 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.3■□□□□ 0.36
GPC3P51654 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
GPC3P51654 KRT8P22-201ENST00000562317 1415 ntBASIC17.3■□□□□ 0.36
GPC3P51654 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.29■□□□□ 0.36
GPC3P51654 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.29■□□□□ 0.36
GPC3P51654 AL162726.2-201ENST00000438986 1017 ntBASIC17.29■□□□□ 0.36
GPC3P51654 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 KRT18P43-201ENST00000469825 1281 ntBASIC17.29■□□□□ 0.36
GPC3P51654 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 AC124283.3-201ENST00000570869 594 ntBASIC17.29■□□□□ 0.36
GPC3P51654 IFT20-216ENST00000588477 774 ntTSL 5 BASIC17.29■□□□□ 0.36
GPC3P51654 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.29■□□□□ 0.36
GPC3P51654 AL049840.4-201ENST00000602422 811 ntBASIC17.29■□□□□ 0.36
GPC3P51654 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC3P51654 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC3P51654 INTS4P2-202ENST00000614726 2019 ntBASIC17.29■□□□□ 0.36
GPC3P51654 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
GPC3P51654 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
GPC3P51654 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC3P51654 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.29■□□□□ 0.36
GPC3P51654 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
GPC3P51654 AC105917.1-201ENST00000506637 2539 ntBASIC17.28■□□□□ 0.36
GPC3P51654 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.28■□□□□ 0.36
GPC3P51654 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
GPC3P51654 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms