Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF144AP50876 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF144AP50876 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
RNF144AP50876 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
RNF144AP50876 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF144AP50876 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
RNF144AP50876 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.69□□□□□ -0.06
RNF144AP50876 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
RNF144AP50876 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
RNF144AP50876 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
RNF144AP50876 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
RNF144AP50876 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF144AP50876 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.69□□□□□ -0.06
RNF144AP50876 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
RNF144AP50876 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF144AP50876 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF144AP50876 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF144AP50876 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF144AP50876 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF144AP50876 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
RNF144AP50876 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF144AP50876 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.68□□□□□ -0.06
RNF144AP50876 AC004449.1-201ENST00000564240 433 ntBASIC14.68□□□□□ -0.06
RNF144AP50876 MIR4313-201ENST00000580760 101 ntBASIC14.68□□□□□ -0.06
RNF144AP50876 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF144AP50876 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 AP001160.2-201ENST00000596071 487 ntBASIC14.68□□□□□ -0.06
RNF144AP50876 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF144AP50876 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF144AP50876 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF144AP50876 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RNF144AP50876 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.68□□□□□ -0.06
RNF144AP50876 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF144AP50876 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.68□□□□□ -0.06
RNF144AP50876 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
RNF144AP50876 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
RNF144AP50876 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
RNF144AP50876 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF144AP50876 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 KRT8P37-201ENST00000451609 1420 ntBASIC14.67□□□□□ -0.06
RNF144AP50876 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
RNF144AP50876 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 SSR4P1-203ENST00000599569 2260 ntBASIC14.67□□□□□ -0.06
RNF144AP50876 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
RNF144AP50876 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RNF144AP50876 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
RNF144AP50876 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF144AP50876 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 AC004987.2-201ENST00000395959 1148 ntBASIC14.67□□□□□ -0.06
RNF144AP50876 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
RNF144AP50876 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF144AP50876 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF144AP50876 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.67□□□□□ -0.06
RNF144AP50876 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.67□□□□□ -0.06
RNF144AP50876 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.67□□□□□ -0.06
RNF144AP50876 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms