Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.98□□□□□ -0.17
LHX2P50458 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LHX2P50458 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
LHX2P50458 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LHX2P50458 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.97□□□□□ -0.17
LHX2P50458 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.97□□□□□ -0.17
LHX2P50458 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.97□□□□□ -0.17
LHX2P50458 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
LHX2P50458 TMEM14DP-201ENST00000422205 345 ntBASIC13.97□□□□□ -0.17
LHX2P50458 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.97□□□□□ -0.17
LHX2P50458 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.97□□□□□ -0.17
LHX2P50458 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.97□□□□□ -0.17
LHX2P50458 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 GAPDHP40-201ENST00000505218 1006 ntBASIC13.97□□□□□ -0.17
LHX2P50458 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.97□□□□□ -0.17
LHX2P50458 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 AC015936.2-201ENST00000593177 259 ntBASIC13.97□□□□□ -0.17
LHX2P50458 AC107373.2-201ENST00000607735 490 ntBASIC13.97□□□□□ -0.17
LHX2P50458 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.97□□□□□ -0.17
LHX2P50458 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
LHX2P50458 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
LHX2P50458 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.97□□□□□ -0.17
LHX2P50458 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.97□□□□□ -0.17
LHX2P50458 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
LHX2P50458 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LHX2P50458 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.97□□□□□ -0.17
LHX2P50458 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.96□□□□□ -0.17
LHX2P50458 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.96□□□□□ -0.17
LHX2P50458 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.96□□□□□ -0.17
LHX2P50458 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.96□□□□□ -0.17
LHX2P50458 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.96□□□□□ -0.17
LHX2P50458 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LHX2P50458 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LHX2P50458 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LHX2P50458 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
LHX2P50458 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
LHX2P50458 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.96□□□□□ -0.17
LHX2P50458 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LHX2P50458 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.96□□□□□ -0.17
LHX2P50458 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.96□□□□□ -0.17
LHX2P50458 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
LHX2P50458 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.96□□□□□ -0.17
LHX2P50458 PUDP-206ENST00000540122 825 ntTSL 2 BASIC13.96□□□□□ -0.17
LHX2P50458 AC008735.3-201ENST00000596646 500 ntBASIC13.96□□□□□ -0.17
LHX2P50458 AC093813.1-201ENST00000605066 256 ntBASIC13.96□□□□□ -0.17
LHX2P50458 AC025181.2-201ENST00000606994 802 ntBASIC13.96□□□□□ -0.17
LHX2P50458 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.96□□□□□ -0.17
LHX2P50458 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.96□□□□□ -0.17
LHX2P50458 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LHX2P50458 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.96□□□□□ -0.17
LHX2P50458 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LHX2P50458 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LHX2P50458 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
LHX2P50458 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
LHX2P50458 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.96□□□□□ -0.18
LHX2P50458 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.96□□□□□ -0.18
LHX2P50458 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms