Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
GABRA4P48169 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
GABRA4P48169 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.83□□□□□ -0.04
GABRA4P48169 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.82□□□□□ -0.04
GABRA4P48169 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.82□□□□□ -0.04
GABRA4P48169 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
GABRA4P48169 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GABRA4P48169 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.82□□□□□ -0.04
GABRA4P48169 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
GABRA4P48169 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 AC112492.5-201ENST00000421897 457 ntBASIC14.82□□□□□ -0.04
GABRA4P48169 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.82□□□□□ -0.04
GABRA4P48169 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.82□□□□□ -0.04
GABRA4P48169 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.82□□□□□ -0.04
GABRA4P48169 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.82□□□□□ -0.04
GABRA4P48169 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.82□□□□□ -0.04
GABRA4P48169 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.82□□□□□ -0.04
GABRA4P48169 AC025181.2-201ENST00000606994 802 ntBASIC14.82□□□□□ -0.04
GABRA4P48169 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
GABRA4P48169 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.82□□□□□ -0.04
GABRA4P48169 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
GABRA4P48169 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
GABRA4P48169 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
GABRA4P48169 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.81□□□□□ -0.04
GABRA4P48169 CICP6-201ENST00000457191 2729 ntBASIC14.81□□□□□ -0.04
GABRA4P48169 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
GABRA4P48169 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.81□□□□□ -0.04
GABRA4P48169 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
GABRA4P48169 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.81□□□□□ -0.04
GABRA4P48169 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
GABRA4P48169 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.81□□□□□ -0.04
GABRA4P48169 ARSEP1-201ENST00000420443 635 ntBASIC14.81□□□□□ -0.04
GABRA4P48169 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.81□□□□□ -0.04
GABRA4P48169 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
GABRA4P48169 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
GABRA4P48169 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.81□□□□□ -0.04
GABRA4P48169 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.81□□□□□ -0.04
GABRA4P48169 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GABRA4P48169 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.81□□□□□ -0.04
GABRA4P48169 AC093813.1-201ENST00000605066 256 ntBASIC14.81□□□□□ -0.04
GABRA4P48169 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.81□□□□□ -0.04
GABRA4P48169 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.81□□□□□ -0.04
GABRA4P48169 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.81□□□□□ -0.04
GABRA4P48169 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 AC092127.1-201ENST00000567093 3455 ntBASIC14.81□□□□□ -0.04
GABRA4P48169 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
GABRA4P48169 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.81□□□□□ -0.04
GABRA4P48169 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.81□□□□□ -0.04
GABRA4P48169 AC009090.5-201ENST00000624886 2285 ntBASIC14.81□□□□□ -0.04
GABRA4P48169 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 AC084364.1-201ENST00000551967 1556 ntBASIC14.81□□□□□ -0.04
GABRA4P48169 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.81□□□□□ -0.04
GABRA4P48169 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GABRA4P48169 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.81□□□□□ -0.04
GABRA4P48169 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.81□□□□□ -0.04
GABRA4P48169 AC022188.1-201ENST00000620960 1664 ntBASIC14.81□□□□□ -0.04
GABRA4P48169 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms