Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BRCC3P46736 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BRCC3P46736 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
BRCC3P46736 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
BRCC3P46736 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
BRCC3P46736 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
BRCC3P46736 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCC3P46736 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCC3P46736 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
BRCC3P46736 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
BRCC3P46736 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.63■□□□□ 0.25
BRCC3P46736 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.63■□□□□ 0.25
BRCC3P46736 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.63■□□□□ 0.25
BRCC3P46736 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCC3P46736 AC005229.1-201ENST00000392885 409 ntBASIC16.63■□□□□ 0.25
BRCC3P46736 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 AC012441.1-201ENST00000446669 685 ntBASIC16.63■□□□□ 0.25
BRCC3P46736 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
BRCC3P46736 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCC3P46736 GAPDHP40-201ENST00000505218 1006 ntBASIC16.63■□□□□ 0.25
BRCC3P46736 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.63■□□□□ 0.25
BRCC3P46736 AC093813.1-201ENST00000605066 256 ntBASIC16.63■□□□□ 0.25
BRCC3P46736 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.63■□□□□ 0.25
BRCC3P46736 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCC3P46736 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.63■□□□□ 0.25
BRCC3P46736 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.63■□□□□ 0.25
BRCC3P46736 AC092127.1-201ENST00000567093 3455 ntBASIC16.63■□□□□ 0.25
BRCC3P46736 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
BRCC3P46736 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.63■□□□□ 0.25
BRCC3P46736 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
BRCC3P46736 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BRCC3P46736 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.62■□□□□ 0.25
BRCC3P46736 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.62■□□□□ 0.25
BRCC3P46736 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.62■□□□□ 0.25
BRCC3P46736 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
BRCC3P46736 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
BRCC3P46736 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
BRCC3P46736 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.62■□□□□ 0.25
BRCC3P46736 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.62■□□□□ 0.25
BRCC3P46736 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.62■□□□□ 0.25
BRCC3P46736 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 AC092933.1-201ENST00000393644 945 ntBASIC16.62■□□□□ 0.25
BRCC3P46736 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.62■□□□□ 0.25
BRCC3P46736 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.62■□□□□ 0.25
BRCC3P46736 AL355864.2-201ENST00000447420 863 ntBASIC16.62■□□□□ 0.25
BRCC3P46736 BNIP3P42-201ENST00000454982 569 ntBASIC16.62■□□□□ 0.25
BRCC3P46736 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
BRCC3P46736 FTH1P14-201ENST00000482930 551 ntBASIC16.62■□□□□ 0.25
BRCC3P46736 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.62■□□□□ 0.25
BRCC3P46736 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.62■□□□□ 0.25
BRCC3P46736 BNIP3P29-201ENST00000598302 571 ntBASIC16.62■□□□□ 0.25
BRCC3P46736 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.62■□□□□ 0.25
BRCC3P46736 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BRCC3P46736 AC011447.5-201ENST00000616168 564 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms