Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.18□□□□□ -0.14
ATRXP46100 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC14.18□□□□□ -0.14
ATRXP46100 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.18□□□□□ -0.14
ATRXP46100 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC14.18□□□□□ -0.14
ATRXP46100 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.18□□□□□ -0.14
ATRXP46100 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.18□□□□□ -0.14
ATRXP46100 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.18□□□□□ -0.14
ATRXP46100 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.18□□□□□ -0.14
ATRXP46100 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATRXP46100 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ATRXP46100 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ATRXP46100 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 AL354989.2-201ENST00000435838 1540 ntBASIC14.17□□□□□ -0.14
ATRXP46100 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
ATRXP46100 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.17□□□□□ -0.14
ATRXP46100 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.17□□□□□ -0.14
ATRXP46100 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC14.17□□□□□ -0.14
ATRXP46100 RBM8B-201ENST00000555532 525 ntBASIC14.17□□□□□ -0.14
ATRXP46100 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.17□□□□□ -0.14
ATRXP46100 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ATRXP46100 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.17□□□□□ -0.14
ATRXP46100 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
ATRXP46100 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.17□□□□□ -0.14
ATRXP46100 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ATRXP46100 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.17□□□□□ -0.14
ATRXP46100 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC14.17□□□□□ -0.14
ATRXP46100 AL354877.1-201ENST00000424412 413 ntBASIC14.17□□□□□ -0.14
ATRXP46100 RBPMSLP-201ENST00000433427 502 ntBASIC14.17□□□□□ -0.14
ATRXP46100 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ATRXP46100 AP003171.2-201ENST00000528208 925 ntBASIC14.17□□□□□ -0.14
ATRXP46100 AC243562.2-201ENST00000561247 970 ntBASIC14.17□□□□□ -0.14
ATRXP46100 MIR4754-201ENST00000582477 89 ntBASIC14.17□□□□□ -0.14
ATRXP46100 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC14.17□□□□□ -0.14
ATRXP46100 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ATRXP46100 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ATRXP46100 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.17□□□□□ -0.14
ATRXP46100 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
ATRXP46100 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ATRXP46100 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATRXP46100 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
ATRXP46100 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
ATRXP46100 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.16□□□□□ -0.14
ATRXP46100 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.16□□□□□ -0.14
ATRXP46100 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.16□□□□□ -0.14
ATRXP46100 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.16□□□□□ -0.14
ATRXP46100 AC142086.5-202ENST00000562500 217 ntBASIC14.16□□□□□ -0.14
ATRXP46100 AL139339.2-201ENST00000608063 657 ntBASIC14.16□□□□□ -0.14
ATRXP46100 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.16□□□□□ -0.14
ATRXP46100 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
ATRXP46100 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.16□□□□□ -0.14
ATRXP46100 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
ATRXP46100 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATRXP46100 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ATRXP46100 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms