Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.39■□□□□ 0.21
MMP13P45452 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MMP13P45452 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.39■□□□□ 0.21
MMP13P45452 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
MMP13P45452 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
MMP13P45452 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.38■□□□□ 0.21
MMP13P45452 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 AL390755.1-201ENST00000623716 2027 ntBASIC16.38■□□□□ 0.21
MMP13P45452 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
MMP13P45452 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.38■□□□□ 0.21
MMP13P45452 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 CNN2P2-201ENST00000443536 909 ntBASIC16.38■□□□□ 0.21
MMP13P45452 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.38■□□□□ 0.21
MMP13P45452 CNN2P3-201ENST00000450201 906 ntBASIC16.38■□□□□ 0.21
MMP13P45452 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.38■□□□□ 0.21
MMP13P45452 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.38■□□□□ 0.21
MMP13P45452 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.38■□□□□ 0.21
MMP13P45452 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.38■□□□□ 0.21
MMP13P45452 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.38■□□□□ 0.21
MMP13P45452 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.38■□□□□ 0.21
MMP13P45452 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 AL136317.3-201ENST00000618497 906 ntBASIC16.38■□□□□ 0.21
MMP13P45452 AC093028.1-201ENST00000622998 982 ntBASIC16.38■□□□□ 0.21
MMP13P45452 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.38■□□□□ 0.21
MMP13P45452 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
MMP13P45452 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
MMP13P45452 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MMP13P45452 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MMP13P45452 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.38■□□□□ 0.21
MMP13P45452 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.38■□□□□ 0.21
MMP13P45452 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 AC013726.1-201ENST00000563747 2285 ntBASIC16.38■□□□□ 0.21
MMP13P45452 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MMP13P45452 AL035456.1-201ENST00000456064 1369 ntBASIC16.38■□□□□ 0.21
MMP13P45452 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.37■□□□□ 0.21
MMP13P45452 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.37■□□□□ 0.21
MMP13P45452 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.37■□□□□ 0.21
MMP13P45452 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
MMP13P45452 AC004987.2-201ENST00000395959 1148 ntBASIC16.37■□□□□ 0.21
MMP13P45452 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.37■□□□□ 0.21
MMP13P45452 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.37■□□□□ 0.21
MMP13P45452 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 LINC00552-201ENST00000625151 2579 ntBASIC16.37■□□□□ 0.21
MMP13P45452 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 CYP4F24P-201ENST00000586049 1580 ntBASIC16.37■□□□□ 0.21
MMP13P45452 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
MMP13P45452 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP13P45452 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP13P45452 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.37■□□□□ 0.21
MMP13P45452 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms