Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLCN1P35523 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
CLCN1P35523 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLCN1P35523 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCN1P35523 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCN1P35523 AC129492.6-201ENST00000611383 1305 ntBASIC17.97■□□□□ 0.47
CLCN1P35523 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CLCN1P35523 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN1P35523 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLCN1P35523 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CLCN1P35523 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CLCN1P35523 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.96■□□□□ 0.47
CLCN1P35523 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN1P35523 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLCN1P35523 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN1P35523 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN1P35523 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
CLCN1P35523 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.96■□□□□ 0.47
CLCN1P35523 AC009078.2-202ENST00000463353 338 ntBASIC17.96■□□□□ 0.47
CLCN1P35523 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN1P35523 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.96■□□□□ 0.47
CLCN1P35523 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN1P35523 AC091167.2-201ENST00000579581 588 ntBASIC17.96■□□□□ 0.47
CLCN1P35523 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN1P35523 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.96■□□□□ 0.47
CLCN1P35523 AC116407.3-201ENST00000623905 1129 ntBASIC17.96■□□□□ 0.47
CLCN1P35523 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CLCN1P35523 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN1P35523 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN1P35523 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CLCN1P35523 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN1P35523 PCGF3-213ENST00000620529 1899 ntBASIC17.96■□□□□ 0.47
CLCN1P35523 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN1P35523 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.96■□□□□ 0.47
CLCN1P35523 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
CLCN1P35523 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CLCN1P35523 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN1P35523 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 AL353732.1-201ENST00000569618 1459 ntBASIC17.95■□□□□ 0.46
CLCN1P35523 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN1P35523 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 AC126365.1-201ENST00000578585 1514 ntBASIC17.95■□□□□ 0.46
CLCN1P35523 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN1P35523 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN1P35523 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CLCN1P35523 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN1P35523 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.95■□□□□ 0.46
CLCN1P35523 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.95■□□□□ 0.46
CLCN1P35523 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN1P35523 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN1P35523 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.95■□□□□ 0.46
CLCN1P35523 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CLCN1P35523 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 AC105206.1-202ENST00000314927 2368 ntBASIC17.95■□□□□ 0.46
CLCN1P35523 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.95■□□□□ 0.46
CLCN1P35523 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN1P35523 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN1P35523 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms