Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXA13P31271 DRD5P1-201ENST00000456605 1438 ntBASIC17.82■□□□□ 0.44
HOXA13P31271 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HOXA13P31271 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXA13P31271 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXA13P31271 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXA13P31271 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXA13P31271 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXA13P31271 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HOXA13P31271 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXA13P31271 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXA13P31271 AC244107.1-201ENST00000442033 332 ntBASIC17.82■□□□□ 0.44
HOXA13P31271 GPR53P-205ENST00000457298 1084 ntBASIC17.82■□□□□ 0.44
HOXA13P31271 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.82■□□□□ 0.44
HOXA13P31271 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.82■□□□□ 0.44
HOXA13P31271 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXA13P31271 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXA13P31271 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXA13P31271 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXA13P31271 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.82■□□□□ 0.44
HOXA13P31271 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXA13P31271 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXA13P31271 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.82■□□□□ 0.44
HOXA13P31271 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HOXA13P31271 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXA13P31271 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.82■□□□□ 0.44
HOXA13P31271 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
HOXA13P31271 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HOXA13P31271 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HOXA13P31271 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXA13P31271 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXA13P31271 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXA13P31271 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
HOXA13P31271 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HOXA13P31271 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXA13P31271 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXA13P31271 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
HOXA13P31271 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.81■□□□□ 0.44
HOXA13P31271 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXA13P31271 MIR5189-201ENST00000577370 114 ntBASIC17.81■□□□□ 0.44
HOXA13P31271 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HOXA13P31271 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXA13P31271 AL162274.1-201ENST00000617191 1098 ntBASIC17.81■□□□□ 0.44
HOXA13P31271 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXA13P31271 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXA13P31271 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXA13P31271 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXA13P31271 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.81■□□□□ 0.44
HOXA13P31271 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HOXA13P31271 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.81■□□□□ 0.44
HOXA13P31271 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
HOXA13P31271 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA13P31271 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HOXA13P31271 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXA13P31271 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXA13P31271 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HOXA13P31271 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA13P31271 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA13P31271 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA13P31271 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
HOXA13P31271 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA13P31271 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
HOXA13P31271 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA13P31271 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXA13P31271 CROCCP4-201ENST00000457096 498 ntBASIC17.8■□□□□ 0.44
HOXA13P31271 USP32P1-208ENST00000506594 1164 ntBASIC17.8■□□□□ 0.44
HOXA13P31271 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA13P31271 AC026410.3-201ENST00000514280 936 ntBASIC17.8■□□□□ 0.44
HOXA13P31271 IGHV3-71-201ENST00000523324 359 ntBASIC17.8■□□□□ 0.44
HOXA13P31271 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXA13P31271 TDH-203ENST00000531764 1110 ntBASIC17.8■□□□□ 0.44
HOXA13P31271 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXA13P31271 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA13P31271 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXA13P31271 CLUHP6-201ENST00000580789 941 ntBASIC17.8■□□□□ 0.44
HOXA13P31271 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.8■□□□□ 0.44
HOXA13P31271 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
HOXA13P31271 AC107373.2-201ENST00000607735 490 ntBASIC17.8■□□□□ 0.44
HOXA13P31271 AL008721.1-201ENST00000609964 604 ntBASIC17.8■□□□□ 0.44
HOXA13P31271 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXA13P31271 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.8■□□□□ 0.44
HOXA13P31271 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.8■□□□□ 0.44
HOXA13P31271 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA13P31271 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
HOXA13P31271 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms