Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PTPN3P26045 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
PTPN3P26045 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN3P26045 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN3P26045 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PTPN3P26045 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PTPN3P26045 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
PTPN3P26045 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN3P26045 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.03■□□□□ 0.16
PTPN3P26045 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.03■□□□□ 0.16
PTPN3P26045 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 SLED1-202ENST00000512051 380 ntBASIC16.03■□□□□ 0.16
PTPN3P26045 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN3P26045 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.03■□□□□ 0.16
PTPN3P26045 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.03■□□□□ 0.16
PTPN3P26045 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN3P26045 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN3P26045 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN3P26045 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN3P26045 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN3P26045 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.03■□□□□ 0.16
PTPN3P26045 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PTPN3P26045 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PTPN3P26045 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN3P26045 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PTPN3P26045 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.03■□□□□ 0.16
PTPN3P26045 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN3P26045 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN3P26045 KRT8P44-201ENST00000441609 1350 ntBASIC16.02■□□□□ 0.16
PTPN3P26045 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN3P26045 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN3P26045 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN3P26045 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.02■□□□□ 0.16
PTPN3P26045 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
PTPN3P26045 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN3P26045 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN3P26045 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN3P26045 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN3P26045 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN3P26045 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN3P26045 RPL13P2-201ENST00000440687 659 ntBASIC16.02■□□□□ 0.16
PTPN3P26045 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.02■□□□□ 0.16
PTPN3P26045 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN3P26045 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.02■□□□□ 0.16
PTPN3P26045 DUX4L27-201ENST00000554796 1261 ntBASIC16.02■□□□□ 0.16
PTPN3P26045 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN3P26045 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN3P26045 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.02■□□□□ 0.16
PTPN3P26045 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.02■□□□□ 0.16
PTPN3P26045 LINC01115-203ENST00000606068 577 ntBASIC16.02■□□□□ 0.16
PTPN3P26045 AL844908.2-201ENST00000609461 460 ntBASIC16.02■□□□□ 0.16
PTPN3P26045 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN3P26045 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PTPN3P26045 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.02■□□□□ 0.15
PTPN3P26045 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN3P26045 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN3P26045 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.02■□□□□ 0.15
PTPN3P26045 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.02■□□□□ 0.15
PTPN3P26045 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.02■□□□□ 0.15
PTPN3P26045 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.02■□□□□ 0.15
PTPN3P26045 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.02■□□□□ 0.15
PTPN3P26045 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN3P26045 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN3P26045 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN3P26045 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN3P26045 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN3P26045 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN3P26045 AC100757.3-201ENST00000622361 1406 ntBASIC16.02■□□□□ 0.15
PTPN3P26045 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN3P26045 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN3P26045 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PTPN3P26045 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PTPN3P26045 AL596257.1-201ENST00000641463 2694 ntBASIC16.02■□□□□ 0.15
PTPN3P26045 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN3P26045 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.01■□□□□ 0.15
PTPN3P26045 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PTPN3P26045 TSPY26P-202ENST00000565928 3884 ntBASIC16.01■□□□□ 0.15
PTPN3P26045 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN3P26045 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PTPN3P26045 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 AC087499.5-201ENST00000452760 1342 ntBASIC16.01■□□□□ 0.15
PTPN3P26045 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PTPN3P26045 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PTPN3P26045 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.01■□□□□ 0.15
PTPN3P26045 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.01■□□□□ 0.15
PTPN3P26045 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms