Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.5□□□□□ -0.25
TNFSF4P23510 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.5□□□□□ -0.25
TNFSF4P23510 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.5□□□□□ -0.25
TNFSF4P23510 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 TSSK5P-201ENST00000423978 907 ntBASIC13.5□□□□□ -0.25
TNFSF4P23510 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.5□□□□□ -0.25
TNFSF4P23510 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.5□□□□□ -0.25
TNFSF4P23510 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 SPCS2P1-201ENST00000561636 679 ntBASIC13.5□□□□□ -0.25
TNFSF4P23510 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
TNFSF4P23510 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.5□□□□□ -0.25
TNFSF4P23510 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 AC092364.2-202ENST00000597012 1073 ntBASIC13.5□□□□□ -0.25
TNFSF4P23510 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.5□□□□□ -0.25
TNFSF4P23510 AL844908.2-201ENST00000609461 460 ntBASIC13.5□□□□□ -0.25
TNFSF4P23510 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.5□□□□□ -0.25
TNFSF4P23510 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.5□□□□□ -0.25
TNFSF4P23510 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TNFSF4P23510 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TNFSF4P23510 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.49□□□□□ -0.25
TNFSF4P23510 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TNFSF4P23510 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.49□□□□□ -0.25
TNFSF4P23510 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TNFSF4P23510 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TNFSF4P23510 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.49□□□□□ -0.25
TNFSF4P23510 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TNFSF4P23510 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.49□□□□□ -0.25
TNFSF4P23510 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.49□□□□□ -0.25
TNFSF4P23510 BCRP1-201ENST00000444246 691 ntBASIC13.49□□□□□ -0.25
TNFSF4P23510 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TNFSF4P23510 AC009477.1-201ENST00000452936 217 ntBASIC13.49□□□□□ -0.25
TNFSF4P23510 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TNFSF4P23510 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.49□□□□□ -0.25
TNFSF4P23510 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.49□□□□□ -0.25
TNFSF4P23510 AC135586.1-201ENST00000539323 574 ntBASIC13.49□□□□□ -0.25
TNFSF4P23510 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
TNFSF4P23510 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.49□□□□□ -0.25
TNFSF4P23510 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 AL109936.8-201ENST00000641772 604 ntBASIC13.49□□□□□ -0.25
TNFSF4P23510 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.49□□□□□ -0.25
TNFSF4P23510 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.49□□□□□ -0.25
TNFSF4P23510 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TNFSF4P23510 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.49□□□□□ -0.25
TNFSF4P23510 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TNFSF4P23510 AL603832.2-201ENST00000566195 2125 ntBASIC13.49□□□□□ -0.25
TNFSF4P23510 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms