Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 ZNF259P1-201ENST00000407656 1365 ntBASIC14.65□□□□□ -0.06
TNFRSF1BP20333 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 TPM4P1-201ENST00000436100 807 ntBASIC14.65□□□□□ -0.06
TNFRSF1BP20333 KRT18P3-201ENST00000451602 1288 ntBASIC14.65□□□□□ -0.06
TNFRSF1BP20333 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 AC243562.1-201ENST00000560672 389 ntBASIC14.65□□□□□ -0.06
TNFRSF1BP20333 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 AC092902.6-201ENST00000641783 218 ntBASIC14.65□□□□□ -0.06
TNFRSF1BP20333 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.65□□□□□ -0.06
TNFRSF1BP20333 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.07
TNFRSF1BP20333 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 FAM220BP-201ENST00000377689 816 ntBASIC14.64□□□□□ -0.07
TNFRSF1BP20333 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.64□□□□□ -0.07
TNFRSF1BP20333 ADH5P3-201ENST00000433842 1137 ntBASIC14.64□□□□□ -0.07
TNFRSF1BP20333 SPCS2P4-201ENST00000436160 681 ntBASIC14.64□□□□□ -0.07
TNFRSF1BP20333 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 PHKG1P2-201ENST00000457537 863 ntBASIC14.64□□□□□ -0.07
TNFRSF1BP20333 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 KRT8P48-201ENST00000515599 1220 ntBASIC14.64□□□□□ -0.07
TNFRSF1BP20333 AP000842.3-202ENST00000569238 1080 ntBASIC14.64□□□□□ -0.07
TNFRSF1BP20333 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TNFRSF1BP20333 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
TNFRSF1BP20333 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
TNFRSF1BP20333 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms