Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC3P19447 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
ERCC3P19447 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ERCC3P19447 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC3P19447 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.21■□□□□ 0.51
ERCC3P19447 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 ACTG1P3-201ENST00000431775 1114 ntBASIC18.21■□□□□ 0.51
ERCC3P19447 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC3P19447 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC3P19447 TDH-203ENST00000531764 1110 ntBASIC18.21■□□□□ 0.51
ERCC3P19447 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.21■□□□□ 0.51
ERCC3P19447 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC3P19447 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC3P19447 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 AC026691.1-201ENST00000602502 2017 ntBASIC18.21■□□□□ 0.51
ERCC3P19447 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.21■□□□□ 0.51
ERCC3P19447 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.21■□□□□ 0.51
ERCC3P19447 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
ERCC3P19447 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.21■□□□□ 0.51
ERCC3P19447 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ERCC3P19447 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ERCC3P19447 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ERCC3P19447 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ERCC3P19447 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC3P19447 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ERCC3P19447 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.2■□□□□ 0.5
ERCC3P19447 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
ERCC3P19447 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 PDIA3P1-201ENST00000471856 1510 ntBASIC18.2■□□□□ 0.5
ERCC3P19447 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC3P19447 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC3P19447 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.2■□□□□ 0.5
ERCC3P19447 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ERCC3P19447 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC18.2■□□□□ 0.5
ERCC3P19447 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.2■□□□□ 0.5
ERCC3P19447 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.2■□□□□ 0.5
ERCC3P19447 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.2■□□□□ 0.5
ERCC3P19447 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC3P19447 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ERCC3P19447 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC3P19447 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.2■□□□□ 0.5
ERCC3P19447 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.2■□□□□ 0.5
ERCC3P19447 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ERCC3P19447 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC3P19447 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC3P19447 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC3P19447 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC3P19447 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC3P19447 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC3P19447 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC18.19■□□□□ 0.5
ERCC3P19447 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC3P19447 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC3P19447 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC3P19447 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC3P19447 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC3P19447 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC18.19■□□□□ 0.5
ERCC3P19447 FAM86MP-201ENST00000340703 885 ntBASIC18.19■□□□□ 0.5
ERCC3P19447 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC3P19447 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.19■□□□□ 0.5
ERCC3P19447 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC3P19447 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ERCC3P19447 TOMM22P5-201ENST00000416399 439 ntBASIC18.19■□□□□ 0.5
ERCC3P19447 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ERCC3P19447 CTBP2P5-201ENST00000454986 1264 ntBASIC18.19■□□□□ 0.5
ERCC3P19447 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.19■□□□□ 0.5
ERCC3P19447 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ERCC3P19447 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms