Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCG2P13521 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.04■□□□□ 0.48
SCG2P13521 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCG2P13521 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SCG2P13521 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.04■□□□□ 0.48
SCG2P13521 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG2P13521 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.04■□□□□ 0.48
SCG2P13521 CLK3P2-201ENST00000427566 1453 ntBASIC18.04■□□□□ 0.48
SCG2P13521 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCG2P13521 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG2P13521 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.04■□□□□ 0.48
SCG2P13521 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.04■□□□□ 0.48
SCG2P13521 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.04■□□□□ 0.48
SCG2P13521 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.04■□□□□ 0.48
SCG2P13521 AC093004.1-201ENST00000508850 424 ntBASIC18.04■□□□□ 0.48
SCG2P13521 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.04■□□□□ 0.48
SCG2P13521 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.04■□□□□ 0.48
SCG2P13521 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.04■□□□□ 0.48
SCG2P13521 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SCG2P13521 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SCG2P13521 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.04■□□□□ 0.48
SCG2P13521 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.04■□□□□ 0.48
SCG2P13521 AC000095.1-201ENST00000603208 874 ntBASIC18.04■□□□□ 0.48
SCG2P13521 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG2P13521 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.04■□□□□ 0.48
SCG2P13521 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG2P13521 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCG2P13521 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
SCG2P13521 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG2P13521 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.04■□□□□ 0.48
SCG2P13521 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.04■□□□□ 0.48
SCG2P13521 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SCG2P13521 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SCG2P13521 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SCG2P13521 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
SCG2P13521 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
SCG2P13521 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.03■□□□□ 0.48
SCG2P13521 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.03■□□□□ 0.48
SCG2P13521 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.03■□□□□ 0.48
SCG2P13521 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.03■□□□□ 0.48
SCG2P13521 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.03■□□□□ 0.48
SCG2P13521 MEP1AP4-201ENST00000423244 1087 ntBASIC18.03■□□□□ 0.48
SCG2P13521 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.03■□□□□ 0.48
SCG2P13521 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.03■□□□□ 0.48
SCG2P13521 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.03■□□□□ 0.48
SCG2P13521 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 AC004233.3-201ENST00000607794 1269 ntBASIC18.03■□□□□ 0.48
SCG2P13521 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.03■□□□□ 0.48
SCG2P13521 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SCG2P13521 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.03■□□□□ 0.48
SCG2P13521 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
SCG2P13521 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 PPT1-215ENST00000641471 2368 ntBASIC18.03■□□□□ 0.48
SCG2P13521 SLC7A15P-201ENST00000424028 1363 ntBASIC18.03■□□□□ 0.48
SCG2P13521 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.03■□□□□ 0.48
SCG2P13521 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SCG2P13521 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
SCG2P13521 AC046158.3-201ENST00000624947 2558 ntBASIC18.02■□□□□ 0.48
SCG2P13521 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCG2P13521 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC18.02■□□□□ 0.48
SCG2P13521 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCG2P13521 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.02■□□□□ 0.48
SCG2P13521 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCG2P13521 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
SCG2P13521 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCG2P13521 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCG2P13521 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCG2P13521 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SCG2P13521 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.02■□□□□ 0.48
SCG2P13521 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.02■□□□□ 0.48
SCG2P13521 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.02■□□□□ 0.48
SCG2P13521 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.02■□□□□ 0.48
SCG2P13521 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.02■□□□□ 0.48
SCG2P13521 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SCG2P13521 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCG2P13521 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
SCG2P13521 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.02■□□□□ 0.48
SCG2P13521 AC055876.2-201ENST00000531834 546 ntBASIC18.02■□□□□ 0.48
SCG2P13521 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC18.02■□□□□ 0.48
SCG2P13521 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.02■□□□□ 0.48
SCG2P13521 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.02■□□□□ 0.48
SCG2P13521 AL132655.2-201ENST00000596276 594 ntBASIC18.02■□□□□ 0.48
SCG2P13521 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.02■□□□□ 0.48
SCG2P13521 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SCG2P13521 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.02■□□□□ 0.47
SCG2P13521 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.02■□□□□ 0.47
SCG2P13521 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCG2P13521 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SCG2P13521 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms