Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CYP3A4P08684 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CYP3A4P08684 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CYP3A4P08684 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CYP3A4P08684 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CYP3A4P08684 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CYP3A4P08684 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CYP3A4P08684 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.53■□□□□ 0.4
CYP3A4P08684 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 AC093525.8-201ENST00000624099 1342 ntBASIC17.53■□□□□ 0.4
CYP3A4P08684 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.53■□□□□ 0.4
CYP3A4P08684 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.53■□□□□ 0.4
CYP3A4P08684 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 AC087481.3-201ENST00000602886 1894 ntBASIC17.53■□□□□ 0.4
CYP3A4P08684 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CYP3A4P08684 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 TTTY23B-201ENST00000442790 549 ntBASIC17.53■□□□□ 0.4
CYP3A4P08684 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.53■□□□□ 0.4
CYP3A4P08684 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.53■□□□□ 0.4
CYP3A4P08684 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 MIR5189-201ENST00000577370 114 ntBASIC17.53■□□□□ 0.4
CYP3A4P08684 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
CYP3A4P08684 AC015936.2-201ENST00000593177 259 ntBASIC17.53■□□□□ 0.4
CYP3A4P08684 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.53■□□□□ 0.4
CYP3A4P08684 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.53■□□□□ 0.4
CYP3A4P08684 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.53■□□□□ 0.4
CYP3A4P08684 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.53■□□□□ 0.4
CYP3A4P08684 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.53■□□□□ 0.4
CYP3A4P08684 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CYP3A4P08684 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
CYP3A4P08684 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 TMBIM7P-203ENST00000641617 1718 ntBASIC17.52■□□□□ 0.4
CYP3A4P08684 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.52■□□□□ 0.4
CYP3A4P08684 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.52■□□□□ 0.4
CYP3A4P08684 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CYP3A4P08684 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CYP3A4P08684 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CYP3A4P08684 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CYP3A4P08684 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.52■□□□□ 0.4
CYP3A4P08684 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.52■□□□□ 0.4
CYP3A4P08684 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.52■□□□□ 0.4
CYP3A4P08684 AC106886.1-201ENST00000568660 600 ntBASIC17.52■□□□□ 0.4
CYP3A4P08684 AC009486.1-201ENST00000569860 813 ntBASIC17.52■□□□□ 0.4
CYP3A4P08684 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CYP3A4P08684 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CYP3A4P08684 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.52■□□□□ 0.39
CYP3A4P08684 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CYP3A4P08684 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CYP3A4P08684 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CYP3A4P08684 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CYP3A4P08684 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.51■□□□□ 0.39
CYP3A4P08684 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CYP3A4P08684 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms