Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 GNAQP1-201ENST00000444815 1067 ntBASIC12.16□□□□□ -0.46
TRBV12-3P01733 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 SERBP1P5-201ENST00000510079 1181 ntBASIC12.16□□□□□ -0.46
TRBV12-3P01733 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 SLED1-202ENST00000512051 380 ntBASIC12.16□□□□□ -0.46
TRBV12-3P01733 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.16□□□□□ -0.46
TRBV12-3P01733 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.16□□□□□ -0.46
TRBV12-3P01733 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.16□□□□□ -0.46
TRBV12-3P01733 5S_rRNA.22-201ENST00000614916 106 ntBASIC12.16□□□□□ -0.46
TRBV12-3P01733 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.16□□□□□ -0.46
TRBV12-3P01733 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 AC136621.1-201ENST00000624017 2304 ntBASIC12.16□□□□□ -0.46
TRBV12-3P01733 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
TRBV12-3P01733 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
TRBV12-3P01733 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 AC105250.1-201ENST00000509378 2057 ntBASIC12.15□□□□□ -0.46
TRBV12-3P01733 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 BTBD7P1-201ENST00000447253 1453 ntBASIC12.15□□□□□ -0.46
TRBV12-3P01733 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
TRBV12-3P01733 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 AC236430.1-201ENST00000402231 743 ntBASIC12.15□□□□□ -0.46
TRBV12-3P01733 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 FLJ16779-201ENST00000612722 7638 ntBASIC12.15□□□□□ -0.46
TRBV12-3P01733 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
TRBV12-3P01733 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms