Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 PUDPP3-201ENST00000445368 636 ntBASIC17.67■□□□□ 0.42
ALDH1A1P00352 AC104073.2-201ENST00000453737 312 ntBASIC17.67■□□□□ 0.42
ALDH1A1P00352 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 AC106820.3-201ENST00000561653 397 ntBASIC17.67■□□□□ 0.42
ALDH1A1P00352 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ALDH1A1P00352 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ALDH1A1P00352 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 AC105020.1-201ENST00000435356 2205 ntBASIC17.66■□□□□ 0.42
ALDH1A1P00352 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.66■□□□□ 0.42
ALDH1A1P00352 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 IGLV3-15-201ENST00000518356 244 ntBASIC17.66■□□□□ 0.42
ALDH1A1P00352 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 AC135983.4-201ENST00000564116 1262 ntBASIC17.66■□□□□ 0.42
ALDH1A1P00352 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 AC068587.8-201ENST00000641239 219 ntBASIC17.66■□□□□ 0.42
ALDH1A1P00352 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ALDH1A1P00352 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ALDH1A1P00352 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALDH1A1P00352 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALDH1A1P00352 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALDH1A1P00352 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALDH1A1P00352 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALDH1A1P00352 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 AC022616.1-201ENST00000518688 554 ntBASIC17.65■□□□□ 0.42
ALDH1A1P00352 AP003171.2-201ENST00000528208 925 ntBASIC17.65■□□□□ 0.42
ALDH1A1P00352 RTN3P1-201ENST00000536295 711 ntBASIC17.65■□□□□ 0.42
ALDH1A1P00352 AC103988.2-201ENST00000561804 725 ntBASIC17.65■□□□□ 0.42
ALDH1A1P00352 AC005324.6-201ENST00000587972 613 ntBASIC17.65■□□□□ 0.42
ALDH1A1P00352 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALDH1A1P00352 AC018892.3-201ENST00000623986 2499 ntBASIC17.65■□□□□ 0.42
ALDH1A1P00352 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ALDH1A1P00352 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ALDH1A1P00352 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.65■□□□□ 0.42
ALDH1A1P00352 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ALDH1A1P00352 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms