Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ZBED1O96006 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.66■□□□□ 0.26
ZBED1O96006 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ZBED1O96006 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZBED1O96006 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZBED1O96006 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.65■□□□□ 0.26
ZBED1O96006 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZBED1O96006 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZBED1O96006 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZBED1O96006 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZBED1O96006 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZBED1O96006 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.65■□□□□ 0.26
ZBED1O96006 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.65■□□□□ 0.26
ZBED1O96006 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZBED1O96006 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.65■□□□□ 0.26
ZBED1O96006 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.65■□□□□ 0.26
ZBED1O96006 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.65■□□□□ 0.26
ZBED1O96006 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
ZBED1O96006 MIR3197-201ENST00000582241 73 ntBASIC16.65■□□□□ 0.26
ZBED1O96006 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZBED1O96006 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.65■□□□□ 0.26
ZBED1O96006 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.65■□□□□ 0.26
ZBED1O96006 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.65■□□□□ 0.26
ZBED1O96006 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.65■□□□□ 0.26
ZBED1O96006 AC008761.3-201ENST00000624803 892 ntBASIC16.65■□□□□ 0.26
ZBED1O96006 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ZBED1O96006 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 LINC00554-201ENST00000564841 3011 ntBASIC16.65■□□□□ 0.26
ZBED1O96006 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ZBED1O96006 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZBED1O96006 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZBED1O96006 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
ZBED1O96006 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ZBED1O96006 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ZBED1O96006 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.26
ZBED1O96006 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ZBED1O96006 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.26
ZBED1O96006 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.64■□□□□ 0.25
ZBED1O96006 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ZBED1O96006 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.64■□□□□ 0.25
ZBED1O96006 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
ZBED1O96006 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.64■□□□□ 0.25
ZBED1O96006 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.64■□□□□ 0.25
ZBED1O96006 AC074338.1-201ENST00000416825 156 ntBASIC16.64■□□□□ 0.25
ZBED1O96006 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.64■□□□□ 0.25
ZBED1O96006 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.64■□□□□ 0.25
ZBED1O96006 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.64■□□□□ 0.25
ZBED1O96006 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.64■□□□□ 0.25
ZBED1O96006 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.64■□□□□ 0.25
ZBED1O96006 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ZBED1O96006 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.64■□□□□ 0.25
ZBED1O96006 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.64■□□□□ 0.25
ZBED1O96006 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.64■□□□□ 0.25
ZBED1O96006 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.64■□□□□ 0.25
ZBED1O96006 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.64■□□□□ 0.25
ZBED1O96006 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 AL607033.1-201ENST00000623900 1599 ntBASIC16.64■□□□□ 0.25
ZBED1O96006 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZBED1O96006 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZBED1O96006 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
ZBED1O96006 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ZBED1O96006 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZBED1O96006 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.63■□□□□ 0.25
ZBED1O96006 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ZBED1O96006 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.63■□□□□ 0.25
ZBED1O96006 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.63■□□□□ 0.25
ZBED1O96006 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZBED1O96006 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.63■□□□□ 0.25
ZBED1O96006 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
ZBED1O96006 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.63■□□□□ 0.25
ZBED1O96006 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms