Protein–RNA interactions for Protein: O95696

BRD1, Bromodomain-containing protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD1O95696 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.34■□□□□ 0.53
BRD1O95696 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
BRD1O95696 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.34■□□□□ 0.53
BRD1O95696 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
BRD1O95696 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.34■□□□□ 0.53
BRD1O95696 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC18.34■□□□□ 0.53
BRD1O95696 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.34■□□□□ 0.53
BRD1O95696 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC18.34■□□□□ 0.53
BRD1O95696 AC093028.1-201ENST00000622998 982 ntBASIC18.34■□□□□ 0.53
BRD1O95696 AC092902.6-201ENST00000641783 218 ntBASIC18.34■□□□□ 0.53
BRD1O95696 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.34■□□□□ 0.53
BRD1O95696 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.34■□□□□ 0.53
BRD1O95696 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BRD1O95696 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.34■□□□□ 0.53
BRD1O95696 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC18.33■□□□□ 0.53
BRD1O95696 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD1O95696 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD1O95696 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.33■□□□□ 0.53
BRD1O95696 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD1O95696 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRD1O95696 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC18.33■□□□□ 0.53
BRD1O95696 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRD1O95696 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRD1O95696 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.33■□□□□ 0.53
BRD1O95696 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
BRD1O95696 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
BRD1O95696 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD1O95696 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRD1O95696 MIR346-201ENST00000362234 95 ntBASIC18.33■□□□□ 0.52
BRD1O95696 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD1O95696 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD1O95696 AC136604.1-201ENST00000418535 575 ntBASIC18.33■□□□□ 0.52
BRD1O95696 FAM58CP-201ENST00000435741 640 ntBASIC18.33■□□□□ 0.52
BRD1O95696 AL139010.1-201ENST00000454878 894 ntBASIC18.33■□□□□ 0.52
BRD1O95696 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC18.33■□□□□ 0.52
BRD1O95696 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.33■□□□□ 0.52
BRD1O95696 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.33■□□□□ 0.52
BRD1O95696 AL135744.1-201ENST00000565098 629 ntBASIC18.33■□□□□ 0.52
BRD1O95696 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.33■□□□□ 0.52
BRD1O95696 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD1O95696 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD1O95696 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD1O95696 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD1O95696 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD1O95696 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD1O95696 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD1O95696 AL607033.1-201ENST00000623900 1599 ntBASIC18.33■□□□□ 0.52
BRD1O95696 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD1O95696 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.33■□□□□ 0.52
BRD1O95696 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.33■□□□□ 0.52
BRD1O95696 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD1O95696 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD1O95696 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRD1O95696 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
BRD1O95696 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
BRD1O95696 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD1O95696 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BRD1O95696 AL355306.1-201ENST00000415580 579 ntBASIC18.32■□□□□ 0.52
BRD1O95696 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.32■□□□□ 0.52
BRD1O95696 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.32■□□□□ 0.52
BRD1O95696 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.32■□□□□ 0.52
BRD1O95696 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD1O95696 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
BRD1O95696 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.32■□□□□ 0.52
BRD1O95696 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRD1O95696 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms