Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VAPBO95292 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.84■□□□□ 0.13
VAPBO95292 AC136604.1-201ENST00000418535 575 ntBASIC15.84■□□□□ 0.13
VAPBO95292 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.84■□□□□ 0.13
VAPBO95292 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.84■□□□□ 0.13
VAPBO95292 HIST3H2BA-201ENST00000436555 524 ntBASIC15.84■□□□□ 0.13
VAPBO95292 AP006288.1-201ENST00000446065 395 ntBASIC15.84■□□□□ 0.13
VAPBO95292 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.84■□□□□ 0.13
VAPBO95292 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.84■□□□□ 0.13
VAPBO95292 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.84■□□□□ 0.13
VAPBO95292 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.84■□□□□ 0.13
VAPBO95292 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.84■□□□□ 0.13
VAPBO95292 SNHG9-202ENST00000564014 471 ntBASIC15.84■□□□□ 0.13
VAPBO95292 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.84■□□□□ 0.13
VAPBO95292 AL596442.2-201ENST00000610240 980 ntBASIC15.84■□□□□ 0.13
VAPBO95292 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.84■□□□□ 0.13
VAPBO95292 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VAPBO95292 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VAPBO95292 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VAPBO95292 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
VAPBO95292 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VAPBO95292 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.84■□□□□ 0.13
VAPBO95292 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VAPBO95292 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VAPBO95292 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
VAPBO95292 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VAPBO95292 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VAPBO95292 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VAPBO95292 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
VAPBO95292 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
VAPBO95292 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
VAPBO95292 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
VAPBO95292 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
VAPBO95292 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
VAPBO95292 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
VAPBO95292 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 FO393414.2-201ENST00000405153 598 ntBASIC15.83■□□□□ 0.12
VAPBO95292 SPDYE7P-202ENST00000420373 878 ntBASIC15.83■□□□□ 0.12
VAPBO95292 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.83■□□□□ 0.12
VAPBO95292 AC004967.1-201ENST00000453589 447 ntBASIC15.83■□□□□ 0.12
VAPBO95292 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.83■□□□□ 0.12
VAPBO95292 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VAPBO95292 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.83■□□□□ 0.12
VAPBO95292 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.83■□□□□ 0.12
VAPBO95292 AC027612.4-201ENST00000605371 583 ntBASIC15.83■□□□□ 0.12
VAPBO95292 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.83■□□□□ 0.12
VAPBO95292 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.83■□□□□ 0.12
VAPBO95292 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 KRT8P12-202ENST00000472924 1397 ntBASIC15.83■□□□□ 0.12
VAPBO95292 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
VAPBO95292 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
VAPBO95292 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.83■□□□□ 0.12
VAPBO95292 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
VAPBO95292 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.83■□□□□ 0.12
VAPBO95292 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
VAPBO95292 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VAPBO95292 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
VAPBO95292 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
VAPBO95292 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
VAPBO95292 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.82■□□□□ 0.12
VAPBO95292 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
VAPBO95292 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VAPBO95292 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.82■□□□□ 0.12
VAPBO95292 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms