Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.64■□□□□ 0.41
ACTN4O43707 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.64■□□□□ 0.41
ACTN4O43707 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ACTN4O43707 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.64■□□□□ 0.41
ACTN4O43707 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.64■□□□□ 0.41
ACTN4O43707 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.64■□□□□ 0.41
ACTN4O43707 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.64■□□□□ 0.41
ACTN4O43707 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.64■□□□□ 0.41
ACTN4O43707 AL512356.2-201ENST00000546955 174 ntBASIC17.64■□□□□ 0.41
ACTN4O43707 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.64■□□□□ 0.41
ACTN4O43707 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.64■□□□□ 0.41
ACTN4O43707 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
ACTN4O43707 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.64■□□□□ 0.41
ACTN4O43707 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.64■□□□□ 0.41
ACTN4O43707 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 LINC00528-201ENST00000600723 2160 ntBASIC17.64■□□□□ 0.41
ACTN4O43707 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ACTN4O43707 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC17.64■□□□□ 0.41
ACTN4O43707 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.64■□□□□ 0.41
ACTN4O43707 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ACTN4O43707 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ACTN4O43707 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ACTN4O43707 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.64■□□□□ 0.41
ACTN4O43707 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.64■□□□□ 0.41
ACTN4O43707 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ACTN4O43707 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
ACTN4O43707 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.63■□□□□ 0.41
ACTN4O43707 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.63■□□□□ 0.41
ACTN4O43707 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.63■□□□□ 0.41
ACTN4O43707 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.63■□□□□ 0.41
ACTN4O43707 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 AC254562.1-201ENST00000417586 456 ntBASIC17.63■□□□□ 0.41
ACTN4O43707 AP006288.1-201ENST00000446065 395 ntBASIC17.63■□□□□ 0.41
ACTN4O43707 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.63■□□□□ 0.41
ACTN4O43707 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ACTN4O43707 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.63■□□□□ 0.41
ACTN4O43707 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.63■□□□□ 0.41
ACTN4O43707 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.63■□□□□ 0.41
ACTN4O43707 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.63■□□□□ 0.41
ACTN4O43707 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ACTN4O43707 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 LINC02228-204ENST00000642115 2962 ntBASIC17.63■□□□□ 0.41
ACTN4O43707 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ACTN4O43707 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.63■□□□□ 0.41
ACTN4O43707 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
ACTN4O43707 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.62■□□□□ 0.41
ACTN4O43707 AC084364.1-201ENST00000551967 1556 ntBASIC17.62■□□□□ 0.41
ACTN4O43707 AC063926.3-201ENST00000624734 5658 ntBASIC17.62■□□□□ 0.41
ACTN4O43707 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
ACTN4O43707 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
ACTN4O43707 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC17.62■□□□□ 0.41
ACTN4O43707 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.62■□□□□ 0.41
ACTN4O43707 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.62■□□□□ 0.41
ACTN4O43707 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ACTN4O43707 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms