Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LDB2O43679 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LDB2O43679 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LDB2O43679 KRT8P44-201ENST00000441609 1350 ntBASIC15.71■□□□□ 0.11
LDB2O43679 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.71■□□□□ 0.11
LDB2O43679 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.71■□□□□ 0.11
LDB2O43679 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LDB2O43679 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LDB2O43679 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LDB2O43679 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
LDB2O43679 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.71■□□□□ 0.1
LDB2O43679 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.71■□□□□ 0.1
LDB2O43679 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
LDB2O43679 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 AC084364.1-201ENST00000551967 1556 ntBASIC15.7■□□□□ 0.1
LDB2O43679 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.7■□□□□ 0.1
LDB2O43679 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.7■□□□□ 0.1
LDB2O43679 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LDB2O43679 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.7■□□□□ 0.1
LDB2O43679 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
LDB2O43679 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC15.7■□□□□ 0.1
LDB2O43679 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.7■□□□□ 0.1
LDB2O43679 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.7■□□□□ 0.1
LDB2O43679 AC114501.2-201ENST00000439631 535 ntBASIC15.7■□□□□ 0.1
LDB2O43679 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.7■□□□□ 0.1
LDB2O43679 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.7■□□□□ 0.1
LDB2O43679 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.7■□□□□ 0.1
LDB2O43679 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.7■□□□□ 0.1
LDB2O43679 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.7■□□□□ 0.1
LDB2O43679 AC092364.2-202ENST00000597012 1073 ntBASIC15.7■□□□□ 0.1
LDB2O43679 AC004461.2-201ENST00000629517 803 ntBASIC15.7■□□□□ 0.1
LDB2O43679 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.7■□□□□ 0.1
LDB2O43679 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.7■□□□□ 0.1
LDB2O43679 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.7■□□□□ 0.1
LDB2O43679 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LDB2O43679 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.7■□□□□ 0.1
LDB2O43679 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LDB2O43679 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.7■□□□□ 0.1
LDB2O43679 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.7■□□□□ 0.1
LDB2O43679 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LDB2O43679 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LDB2O43679 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LDB2O43679 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.7■□□□□ 0.1
LDB2O43679 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LDB2O43679 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.69■□□□□ 0.1
LDB2O43679 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
LDB2O43679 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.69■□□□□ 0.1
LDB2O43679 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
LDB2O43679 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.69■□□□□ 0.1
LDB2O43679 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.69■□□□□ 0.1
LDB2O43679 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.69■□□□□ 0.1
LDB2O43679 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.69■□□□□ 0.1
LDB2O43679 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.69■□□□□ 0.1
LDB2O43679 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.69■□□□□ 0.1
LDB2O43679 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LDB2O43679 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.69■□□□□ 0.1
LDB2O43679 AC015910.1-201ENST00000579400 975 ntBASIC15.69■□□□□ 0.1
LDB2O43679 AC005498.2-205ENST00000593218 784 ntBASIC15.69■□□□□ 0.1
LDB2O43679 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.69■□□□□ 0.1
LDB2O43679 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LDB2O43679 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.69■□□□□ 0.1
LDB2O43679 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.69■□□□□ 0.1
LDB2O43679 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LDB2O43679 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LDB2O43679 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LDB2O43679 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
LDB2O43679 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.68■□□□□ 0.1
LDB2O43679 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LDB2O43679 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms