Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CUX2O14529 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC26.23■■□□□ 1.79
CUX2O14529 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
CUX2O14529 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC26.23■■□□□ 1.79
CUX2O14529 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CUX2O14529 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
CUX2O14529 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CUX2O14529 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CUX2O14529 AC023141.7-201ENST00000430646 407 ntBASIC26.23■■□□□ 1.79
CUX2O14529 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC26.23■■□□□ 1.79
CUX2O14529 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC26.23■■□□□ 1.79
CUX2O14529 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CUX2O14529 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CUX2O14529 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC26.22■■□□□ 1.79
CUX2O14529 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
CUX2O14529 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC26.22■■□□□ 1.79
CUX2O14529 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CUX2O14529 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CUX2O14529 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CUX2O14529 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC26.22■■□□□ 1.79
CUX2O14529 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CUX2O14529 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC26.22■■□□□ 1.79
CUX2O14529 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC26.22■■□□□ 1.79
CUX2O14529 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC26.22■■□□□ 1.79
CUX2O14529 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC26.22■■□□□ 1.79
CUX2O14529 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC26.22■■□□□ 1.79
CUX2O14529 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC26.22■■□□□ 1.79
CUX2O14529 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC26.22■■□□□ 1.79
CUX2O14529 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC26.22■■□□□ 1.79
CUX2O14529 AC009955.4-201ENST00000597192 544 ntBASIC26.22■■□□□ 1.79
CUX2O14529 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CUX2O14529 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CUX2O14529 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
CUX2O14529 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CUX2O14529 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC26.21■■□□□ 1.79
CUX2O14529 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CUX2O14529 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CUX2O14529 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CUX2O14529 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CUX2O14529 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC26.21■■□□□ 1.79
CUX2O14529 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC26.21■■□□□ 1.79
CUX2O14529 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CUX2O14529 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
CUX2O14529 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC26.21■■□□□ 1.79
CUX2O14529 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC26.21■■□□□ 1.79
CUX2O14529 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CUX2O14529 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC26.21■■□□□ 1.79
CUX2O14529 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC26.21■■□□□ 1.79
CUX2O14529 PEBP1P2-201ENST00000603980 558 ntBASIC26.21■■□□□ 1.79
CUX2O14529 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CUX2O14529 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CUX2O14529 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CUX2O14529 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CUX2O14529 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CUX2O14529 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CUX2O14529 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
CUX2O14529 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.79
CUX2O14529 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 AC239868.1-201ENST00000369385 493 ntBASIC26.2■■□□□ 1.78
CUX2O14529 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
CUX2O14529 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC26.2■■□□□ 1.78
CUX2O14529 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC26.2■■□□□ 1.78
CUX2O14529 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC26.2■■□□□ 1.78
CUX2O14529 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC26.2■■□□□ 1.78
CUX2O14529 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC26.2■■□□□ 1.78
CUX2O14529 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC26.2■■□□□ 1.78
CUX2O14529 AL645728.2-202ENST00000641679 227 ntBASIC26.2■■□□□ 1.78
CUX2O14529 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.78
CUX2O14529 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC26.2■■□□□ 1.78
CUX2O14529 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC26.2■■□□□ 1.78
CUX2O14529 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.78
CUX2O14529 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CUX2O14529 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CUX2O14529 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC26.19■■□□□ 1.78
CUX2O14529 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CUX2O14529 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
CUX2O14529 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CUX2O14529 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CUX2O14529 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CUX2O14529 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CUX2O14529 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CUX2O14529 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CUX2O14529 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC26.19■■□□□ 1.78
CUX2O14529 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC26.19■■□□□ 1.78
CUX2O14529 PMEL-214ENST00000550447 901 ntTSL 3 BASIC26.19■■□□□ 1.78
CUX2O14529 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CUX2O14529 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC26.19■■□□□ 1.78
CUX2O14529 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC26.19■■□□□ 1.78
CUX2O14529 AL109837.1-201ENST00000603272 613 ntBASIC26.19■■□□□ 1.78
CUX2O14529 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms