Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SOX1O00570 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX1O00570 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SOX1O00570 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
SOX1O00570 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX1O00570 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX1O00570 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.47■□□□□ 0.23
SOX1O00570 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX1O00570 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX1O00570 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SOX1O00570 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SOX1O00570 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.46■□□□□ 0.23
SOX1O00570 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SOX1O00570 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SOX1O00570 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 LRRC59-203ENST00000576448 1531 ntBASIC16.46■□□□□ 0.23
SOX1O00570 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SOX1O00570 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.46■□□□□ 0.23
SOX1O00570 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SOX1O00570 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.46■□□□□ 0.23
SOX1O00570 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.46■□□□□ 0.23
SOX1O00570 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
SOX1O00570 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SOX1O00570 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.46■□□□□ 0.23
SOX1O00570 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.46■□□□□ 0.23
SOX1O00570 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC16.46■□□□□ 0.23
SOX1O00570 AL136295.7-201ENST00000619226 1200 ntBASIC16.46■□□□□ 0.23
SOX1O00570 AL162426.1-201ENST00000624141 743 ntBASIC16.46■□□□□ 0.23
SOX1O00570 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.46■□□□□ 0.23
SOX1O00570 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SOX1O00570 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SOX1O00570 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.22
SOX1O00570 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SOX1O00570 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SOX1O00570 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
SOX1O00570 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.45■□□□□ 0.22
SOX1O00570 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.45■□□□□ 0.22
SOX1O00570 POM121L8P-201ENST00000417732 1281 ntBASIC16.45■□□□□ 0.22
SOX1O00570 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 POM121L9P-203ENST00000441984 1285 ntBASIC16.45■□□□□ 0.22
SOX1O00570 LYPLA2P1-203ENST00000447689 696 ntBASIC16.45■□□□□ 0.22
SOX1O00570 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC16.45■□□□□ 0.22
SOX1O00570 RN7SL396P-201ENST00000471086 295 ntBASIC16.45■□□□□ 0.22
SOX1O00570 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.45■□□□□ 0.22
SOX1O00570 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC16.45■□□□□ 0.22
SOX1O00570 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.45■□□□□ 0.22
SOX1O00570 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.45■□□□□ 0.22
SOX1O00570 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.45■□□□□ 0.22
SOX1O00570 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC16.45■□□□□ 0.22
SOX1O00570 AC026803.1-201ENST00000569130 274 ntBASIC16.45■□□□□ 0.22
SOX1O00570 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 AC005632.3-201ENST00000605544 308 ntBASIC16.45■□□□□ 0.22
SOX1O00570 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
SOX1O00570 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.45■□□□□ 0.22
SOX1O00570 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.45■□□□□ 0.22
SOX1O00570 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SOX1O00570 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC16.45■□□□□ 0.22
SOX1O00570 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SOX1O00570 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.45■□□□□ 0.22
SOX1O00570 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms