Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PDLIM1O00151 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM1O00151 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM1O00151 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM1O00151 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.08■□□□□ 0.01
PDLIM1O00151 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.08■□□□□ 0.01
PDLIM1O00151 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM1O00151 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM1O00151 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.08■□□□□ 0.01
PDLIM1O00151 AL353732.1-201ENST00000569618 1459 ntBASIC15.08■□□□□ 0.01
PDLIM1O00151 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
PDLIM1O00151 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
PDLIM1O00151 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM1O00151 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.08■□□□□ 0.01
PDLIM1O00151 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM1O00151 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.08■□□□□ 0.01
PDLIM1O00151 AL365209.1-201ENST00000624418 6473 ntBASIC15.08■□□□□ 0.01
PDLIM1O00151 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM1O00151 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PDLIM1O00151 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.08■□□□□ 0.01
PDLIM1O00151 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.08■□□□□ 0.01
PDLIM1O00151 U82695.1-201ENST00000635752 1889 ntBASIC15.08■□□□□ 0.01
PDLIM1O00151 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM1O00151 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM1O00151 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.08■□□□□ 0
PDLIM1O00151 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.08■□□□□ 0
PDLIM1O00151 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PDLIM1O00151 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM1O00151 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDLIM1O00151 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM1O00151 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.08■□□□□ 0
PDLIM1O00151 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDLIM1O00151 AC108073.2-201ENST00000464002 357 ntBASIC15.08■□□□□ 0
PDLIM1O00151 SLC25A6P2-201ENST00000497974 877 ntBASIC15.08■□□□□ 0
PDLIM1O00151 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM1O00151 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.08■□□□□ 0
PDLIM1O00151 AC087641.1-201ENST00000557561 1021 ntBASIC15.08■□□□□ 0
PDLIM1O00151 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM1O00151 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PDLIM1O00151 GGTLC5P-201ENST00000617623 998 ntBASIC15.08■□□□□ 0
PDLIM1O00151 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.08■□□□□ 0
PDLIM1O00151 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM1O00151 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM1O00151 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PDLIM1O00151 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM1O00151 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM1O00151 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PDLIM1O00151 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.08■□□□□ 0
PDLIM1O00151 ZNF259P1-201ENST00000407656 1365 ntBASIC15.08■□□□□ 0
PDLIM1O00151 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM1O00151 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM1O00151 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.08■□□□□ 0
PDLIM1O00151 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
PDLIM1O00151 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.08■□□□□ 0
PDLIM1O00151 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
PDLIM1O00151 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
PDLIM1O00151 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.07■□□□□ 0
PDLIM1O00151 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.07■□□□□ 0
PDLIM1O00151 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.07■□□□□ 0
PDLIM1O00151 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PDLIM1O00151 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.07■□□□□ 0
PDLIM1O00151 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 MIR574-201ENST00000385209 96 ntBASIC15.07■□□□□ 0
PDLIM1O00151 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.07■□□□□ 0
PDLIM1O00151 PRSS29P-201ENST00000440800 595 ntBASIC15.07■□□□□ 0
PDLIM1O00151 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.07■□□□□ 0
PDLIM1O00151 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.07■□□□□ 0
PDLIM1O00151 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.07■□□□□ 0
PDLIM1O00151 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.07■□□□□ 0
PDLIM1O00151 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.07■□□□□ 0
PDLIM1O00151 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
PDLIM1O00151 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.07■□□□□ 0
PDLIM1O00151 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.07■□□□□ 0
PDLIM1O00151 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PDLIM1O00151 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PDLIM1O00151 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.06■□□□□ 0
PDLIM1O00151 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
PDLIM1O00151 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms