Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 MYCLP1-201ENST00000372451 1075 ntBASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 SLC25A1P3-201ENST00000395415 828 ntBASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 AC004951.3-201ENST00000418645 1148 ntBASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 AC093787.1-201ENST00000450396 207 ntBASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 AC120498.8-201ENST00000614275 531 ntBASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 AC102953.2-201ENST00000609755 3026 ntBASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 GFOD1-202ENST00000379284 8061 ntTSL 2 BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CHKB-CPT1BH3BT56 UNC45B-202ENST00000394570 5638 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 CDHR5-202ENST00000358353 3635 ntAPPRIS P4 TSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 PTK2B-203ENST00000397501 4719 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 LINC02447-202ENST00000501888 2146 ntBASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 GPI-205ENST00000586425 1799 ntTSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 AC106820.4-201ENST00000561847 5616 ntBASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 AC007322.1-201ENST00000426983 750 ntBASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 DBI-210ENST00000542275 757 ntTSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC8.69□□□□□ -1.02
CHKB-CPT1BH3BT56 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms