Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TMEM235A6NFC5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 AC018712.1-201ENST00000455767 687 ntBASIC13.49□□□□□ -0.25
TMEM235A6NFC5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 TP73-AS1-207ENST00000624167 988 ntBASIC13.49□□□□□ -0.25
TMEM235A6NFC5 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
TMEM235A6NFC5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 IGLL3P-201ENST00000412472 434 ntBASIC13.48□□□□□ -0.25
TMEM235A6NFC5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 UPK3BP1-201ENST00000428678 509 ntBASIC13.48□□□□□ -0.25
TMEM235A6NFC5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.48□□□□□ -0.25
TMEM235A6NFC5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.48□□□□□ -0.25
TMEM235A6NFC5 IFNL4P1-201ENST00000607083 540 ntBASIC13.48□□□□□ -0.25
TMEM235A6NFC5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms