Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCDC66A2RUB6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 FAAHP1-202ENST00000446499 1238 ntBASIC17.15■□□□□ 0.34
CCDC66A2RUB6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 FAM215A-202ENST00000632077 792 ntBASIC17.15■□□□□ 0.34
CCDC66A2RUB6 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 AC008677.1-201ENST00000519230 1561 ntBASIC17.15■□□□□ 0.34
CCDC66A2RUB6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCDC66A2RUB6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 AC092919.2-201ENST00000623631 1645 ntBASIC17.14■□□□□ 0.33
CCDC66A2RUB6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 AC108751.1-201ENST00000490852 363 ntBASIC17.14■□□□□ 0.33
CCDC66A2RUB6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 MIR4751-201ENST00000578027 74 ntBASIC17.14■□□□□ 0.33
CCDC66A2RUB6 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 AC148477.8-201ENST00000624298 468 ntBASIC17.14■□□□□ 0.33
CCDC66A2RUB6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.14■□□□□ 0.33
CCDC66A2RUB6 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms