Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 CICP24-201ENST00000605464 2705 ntBASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 MIR6080-201ENST00000617359 66 ntBASIC19■□□□□ 0.63
DDX49Q9Y6V7 AL390754.1-201ENST00000619088 582 ntBASIC19■□□□□ 0.63
DDX49Q9Y6V7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19■□□□□ 0.63
DDX49Q9Y6V7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DDX49Q9Y6V7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 AC107890.1-201ENST00000422478 521 ntBASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 ALG1L8P-201ENST00000533887 760 ntBASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 AC084121.4-201ENST00000641598 221 ntBASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 AF228730.8-201ENST00000642140 221 ntBASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
DDX49Q9Y6V7 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
DDX49Q9Y6V7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms