Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.54■□□□□ 0.4
PTCH2Q9Y6C5 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCH2Q9Y6C5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCH2Q9Y6C5 AC022211.2-201ENST00000585075 2527 ntBASIC17.54■□□□□ 0.4
PTCH2Q9Y6C5 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCH2Q9Y6C5 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTCH2Q9Y6C5 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCH2Q9Y6C5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.54■□□□□ 0.4
PTCH2Q9Y6C5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PTCH2Q9Y6C5 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PTCH2Q9Y6C5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 AC114812.1-204ENST00000449669 728 ntBASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 KRT18P66-201ENST00000452970 1269 ntBASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 PGAM1P5-201ENST00000548011 764 ntBASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 AC022748.3-201ENST00000621828 275 ntBASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 AP001002.3-201ENST00000623482 206 ntBASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.53■□□□□ 0.4
PTCH2Q9Y6C5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 DPM3-202ENST00000368399 517 ntBASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 FGFR3P1-201ENST00000449999 601 ntBASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.52■□□□□ 0.4
PTCH2Q9Y6C5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PTCH2Q9Y6C5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.51■□□□□ 0.39
PTCH2Q9Y6C5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms