Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.92■□□□□ 0.14
RAI2Q9Y5P3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 AC092850.2-201ENST00000623821 2697 ntBASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 AC104794.3-201ENST00000566840 1248 ntBASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAI2Q9Y5P3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.9■□□□□ 0.14
RAI2Q9Y5P3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms