Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 AL162726.2-201ENST00000438986 1017 ntBASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 RN7SL399P-201ENST00000471648 279 ntBASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 AC233724.13-201ENST00000598383 410 ntBASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 AL136982.4-201ENST00000437689 1740 ntBASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 AC005622.1-201ENST00000636801 1703 ntBASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PCDHGA9Q9Y5G4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 AC126177.1-201ENST00000547829 2218 ntBASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 USP32P1-208ENST00000506594 1164 ntBASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 AL391069.4-201ENST00000609583 481 ntBASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA9Q9Y5G4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 SNX29P1-201ENST00000548357 1007 ntBASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA9Q9Y5G4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms