Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 AC079328.2-201ENST00000561241 3354 ntBASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SSX2IPQ9Y2D8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SSX2IPQ9Y2D8 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SSX2IPQ9Y2D8 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SSX2IPQ9Y2D8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC16.96■□□□□ 0.3
SSX2IPQ9Y2D8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
SSX2IPQ9Y2D8 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 RNF216P1-203ENST00000404404 2427 ntBASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 RPL13P2-201ENST00000440687 659 ntBASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 RPL13AP25-201ENST00000484130 612 ntBASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 AC010319.3-201ENST00000597028 470 ntBASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 AC133552.6-201ENST00000613406 534 ntBASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 KRT8P22-201ENST00000562317 1415 ntBASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.95■□□□□ 0.3
SSX2IPQ9Y2D8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms