Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 FAAHP1-202ENST00000446499 1238 ntBASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 AC096734.2-201ENST00000562054 433 ntBASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 AL009183.1-201ENST00000603760 355 ntBASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 C8orf49-201ENST00000525043 1968 ntBASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 REXO1L1P-202ENST00000608646 1974 ntBASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RIMS3Q9UJD0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 AC018892.3-201ENST00000623986 2499 ntBASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 RHOQP3-201ENST00000437982 621 ntBASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 KRT18P34-201ENST00000488218 1270 ntBASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 AC093909.1-201ENST00000504731 1122 ntBASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 RNA5SP415-201ENST00000517246 115 ntBASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 AC109635.5-201ENST00000533593 962 ntBASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 MIR4313-201ENST00000580760 101 ntBASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 AC104692.2-201ENST00000603054 253 ntBASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 AC010507.1-201ENST00000633895 436 ntBASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 AC067930.6-201ENST00000623257 4947 ntBASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms