Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 AZGP1P1-201ENST00000411909 902 ntBASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 BASP1P1-201ENST00000430708 665 ntBASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 AL450472.2-201ENST00000603663 1156 ntBASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PPARGC1AQ9UBK2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 MIR770-201ENST00000390219 98 ntBASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 RNA5SP421-201ENST00000516864 134 ntBASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 AL512361.1-201ENST00000554200 418 ntBASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 AC010336.2-201ENST00000564226 506 ntBASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 AL844908.2-201ENST00000609461 460 ntBASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 AL390754.1-201ENST00000619088 582 ntBASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PPARGC1AQ9UBK2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.43■□□□□ 0.22
PPARGC1AQ9UBK2 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.43■□□□□ 0.22
PPARGC1AQ9UBK2 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PPARGC1AQ9UBK2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.43■□□□□ 0.22
PPARGC1AQ9UBK2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PPARGC1AQ9UBK2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
PPARGC1AQ9UBK2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.43■□□□□ 0.22
PPARGC1AQ9UBK2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms