Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 AC112504.1-201ENST00000623415 1841 ntBASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 TMEM14DP-201ENST00000422205 345 ntBASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 AC244107.1-201ENST00000442033 332 ntBASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 AC106886.1-201ENST00000568660 600 ntBASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 AC124283.3-201ENST00000570869 594 ntBASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 AL162274.1-201ENST00000617191 1098 ntBASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 AL603832.2-201ENST00000566195 2125 ntBASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 AL118508.1-201ENST00000613502 2345 ntBASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CLCF1Q9UBD9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 AL359711.2-201ENST00000563105 872 ntBASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 AC015936.2-201ENST00000593177 259 ntBASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 AC010319.3-201ENST00000597028 470 ntBASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CLCF1Q9UBD9 KRT8P22-201ENST00000562317 1415 ntBASIC13.96□□□□□ -0.18
CLCF1Q9UBD9 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CLCF1Q9UBD9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLCF1Q9UBD9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLCF1Q9UBD9 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLCF1Q9UBD9 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLCF1Q9UBD9 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLCF1Q9UBD9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
CLCF1Q9UBD9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
CLCF1Q9UBD9 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CLCF1Q9UBD9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 AC018695.7-201ENST00000624587 2492 ntBASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CLCF1Q9UBD9 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms