Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
PARPBPQ9NWS1 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 AC022188.1-201ENST00000620960 1664 ntBASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
PARPBPQ9NWS1 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 AL603832.2-201ENST00000566195 2125 ntBASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 SDHAP3-202ENST00000515467 728 ntBASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
PARPBPQ9NWS1 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms