Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 TPRX2P-201ENST00000535362 881 ntBASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 RARRES2P5-201ENST00000564013 466 ntBASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 LINC02560-201ENST00000596379 459 ntBASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 AC000095.1-201ENST00000603208 874 ntBASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 AC112693.3-201ENST00000624819 1983 ntBASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ECHDC1Q9NTX5 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 AC236430.1-201ENST00000402231 743 ntBASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 AC002472.2-201ENST00000442739 958 ntBASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 AC008761.3-201ENST00000624803 892 ntBASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 AC013268.4-201ENST00000637413 2228 ntBASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.1■□□□□ 0.65
ECHDC1Q9NTX5 CLK3P2-201ENST00000427566 1453 ntBASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 HYMAI-201ENST00000635591 3347 ntBASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 MIR4745-201ENST00000577608 62 ntBASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.09■□□□□ 0.65
ECHDC1Q9NTX5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms