Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
CDC42SE1Q9NRR8 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 AL583810.2-201ENST00000556430 3254 ntBASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ADPRH-201ENST00000357003 3439 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 AC023794.5-201ENST00000564380 2157 ntBASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 AC027369.3-201ENST00000530465 3707 ntBASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 AAK1-201ENST00000406297 4499 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 MCCD1P1-208ENST00000445732 328 ntBASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 POU5F1P6-201ENST00000466990 990 ntBASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 MIR3181-201ENST00000578512 73 ntBASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 PTCH1-207ENST00000429896 6563 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ZC3HAV1-201ENST00000242351 7100 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 TBC1D27-201ENST00000261651 4838 ntTSL 2 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CETP-203ENST00000566128 1733 ntTSL 5 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CNTNAP2-201ENST00000361727 9896 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
CDC42SE1Q9NRR8 CACNA1F-201ENST00000323022 6037 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
CDC42SE1Q9NRR8 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms